Bicocca Open Archive

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GRAUDENZI, ALEX
 Distribuzione geografica
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Continente #
NA - Nord America 16.594
EU - Europa 8.373
AS - Asia 6.910
SA - Sud America 971
AF - Africa 180
OC - Oceania 15
Continente sconosciuto - Info sul continente non disponibili 8
Totale 33.051
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Nazione #
US - Stati Uniti d'America 15.943
IT - Italia 2.518
SG - Singapore 2.453
DE - Germania 2.365
CN - Cina 1.490
VN - Vietnam 1.022
RU - Federazione Russa 800
HK - Hong Kong 755
BR - Brasile 749
SE - Svezia 603
IE - Irlanda 582
CA - Canada 556
GB - Regno Unito 259
UA - Ucraina 244
FR - Francia 226
IN - India 222
BD - Bangladesh 206
CH - Svizzera 157
DK - Danimarca 129
FI - Finlandia 112
TR - Turchia 105
ID - Indonesia 102
AR - Argentina 89
KR - Corea 88
NL - Olanda 87
IQ - Iraq 71
ES - Italia 70
ZA - Sudafrica 70
JP - Giappone 66
AT - Austria 61
MX - Messico 55
PK - Pakistan 50
PL - Polonia 46
SA - Arabia Saudita 45
PH - Filippine 39
BE - Belgio 34
CO - Colombia 29
EC - Ecuador 26
VE - Venezuela 26
UZ - Uzbekistan 24
IR - Iran 22
KE - Kenya 20
PY - Paraguay 19
CL - Cile 18
JO - Giordania 17
MA - Marocco 17
TN - Tunisia 15
IL - Israele 14
AU - Australia 13
LT - Lituania 13
MY - Malesia 13
AE - Emirati Arabi Uniti 12
EG - Egitto 12
ET - Etiopia 11
CZ - Repubblica Ceca 10
NP - Nepal 10
LB - Libano 9
OM - Oman 9
PS - Palestinian Territory 9
TH - Thailandia 9
DO - Repubblica Dominicana 8
BG - Bulgaria 7
PE - Perù 7
QA - Qatar 7
SY - Repubblica araba siriana 7
TW - Taiwan 7
DZ - Algeria 6
HU - Ungheria 6
JM - Giamaica 6
LU - Lussemburgo 6
RO - Romania 6
EU - Europa 5
AL - Albania 4
AO - Angola 4
AZ - Azerbaigian 4
CI - Costa d'Avorio 4
CR - Costa Rica 4
GE - Georgia 4
GR - Grecia 4
HN - Honduras 4
KZ - Kazakistan 4
SV - El Salvador 4
AM - Armenia 3
BA - Bosnia-Erzegovina 3
BO - Bolivia 3
LV - Lettonia 3
MD - Moldavia 3
MU - Mauritius 3
NG - Nigeria 3
NO - Norvegia 3
TT - Trinidad e Tobago 3
UY - Uruguay 3
BH - Bahrain 2
BS - Bahamas 2
KH - Cambogia 2
LA - Repubblica Popolare Democratica del Laos 2
MK - Macedonia 2
NI - Nicaragua 2
NZ - Nuova Zelanda 2
PT - Portogallo 2
Totale 33.010
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Città #
Ann Arbor 5.717
Frankfurt am Main 2.081
Singapore 1.297
Ashburn 1.178
Milan 894
Hong Kong 731
Dallas 716
San Jose 694
Fairfield 672
Chandler 577
Dublin 570
Woodbridge 549
Wilmington 543
Toronto 429
Houston 359
New York 335
Seattle 280
Los Angeles 272
Ho Chi Minh City 231
Beijing 218
Hanoi 214
Cambridge 213
Dearborn 203
Jacksonville 203
Santa Clara 189
Princeton 161
Chicago 159
Boardman 148
Hefei 144
The Dalles 141
Dong Ket 128
Shanghai 126
Nanjing 123
Assago 113
Council Bluffs 111
Rome 102
Buffalo 98
Moscow 83
Lauterbourg 82
Seoul 79
São Paulo 78
Jakarta 73
Nuremberg 69
Lawrence 64
Rümlang 58
San Diego 58
Guangzhou 55
Munich 55
Columbus 52
Tokyo 52
Kent 50
Orem 50
Turin 44
Sacramento 42
Altamura 41
Brooklyn 40
Romola 37
Nanchang 36
Lachine 35
London 35
Monza 35
Andover 34
Zurich 34
Atlanta 33
Denver 33
Baghdad 32
Chennai 32
Warsaw 32
Da Nang 31
Helsinki 31
Jinan 30
Brussels 29
Tianjin 29
Zhengzhou 29
Haiphong 28
Johannesburg 28
Rio de Janeiro 27
Ankara 26
Redondo Beach 26
Sesto San Giovanni 25
Vienna 25
Montreal 24
Phoenix 24
Stockholm 24
Bologna 23
Ottawa 23
Shenyang 23
Amsterdam 22
Barcelona 21
Fremont 21
Jeddah 21
Changsha 20
Dhaka 20
Hangzhou 20
Hebei 20
Lappeenranta 20
Tashkent 20
Hải Dương 19
Lissone 19
Turku 19
Totale 23.219
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Nome #
MaREA4Galaxy: metabolic reaction enrichment analysis and visualization of RNA-seq data within Galaxy 727
Integration of single-cell RNA-seq data into population models to characterize cancer metabolism 698
Integration of transcriptomic data and metabolic networks in cancer samples reveals highly significant prognostic power 658
Synchronization effects in a metabolism-driven model of multi-cellular system 636
Longitudinal cancer evolution from single cells 621
The Influence of Nutrients Diffusion on a Metabolism-driven Model of a Multi-cellular System 601
A review of computational strategies for denoising and imputation of single-cell transcriptomic data 588
Characterization of intra-host SARS-CoV-2 variants improves phylogenomic reconstruction and may reveal functionally convergent mutations 577
FBCA, A multiscale modeling framework combining cellular automata and flux balance analysis 572
Personalized therapy design for liquid tumors via optimal control theory 562
Learning mutational graphs of individual tumour evolution from single-cell and multi-region sequencing data 533
Integration of single-cell RNA-sequencing data into flux balance cellular automata 517
VERSO: a comprehensive framework for the inference of robust phylogenies and the quantification of intra-host genomic diversity of viral samples 516
Modeling cumulative biological phenomena with Suppes-Bayes causal networks 513
CAPRI: Efficient Inference of Cancer Progression Models from Cross-sectional Data 508
TRONCO: An R package for the inference of cancer progression models from heterogeneous genomic data 507
An Optimal Control Framework for the Automated Design of Personalized Cancer Treatments 485
A closed-loop optimization framework for personalized cancer therapy design 485
Investigating the Compositional Structure Of Deep Neural Networks 473
Design of the TRONCO bioconductor package for TRanslational ONCOlogy 456
Understanding deep learning with activation pattern diagrams 451
SpidermiR: An R/bioconductor package for integrative analysis with miRNA data 449
On the use of topological features of metabolic networks for the classification of cancer samples 445
J-SPACE: a Julia package for the simulation of spatial models of cancer evolution and of sequencing experiments 444
Efficient computational strategies to learn the structure of probabilistic graphical models of cumulative phenomena 444
null 441
Structural Learning of Probabilistic Graphical Models of Cumulative Phenomena 438
Algorithmic methods to infer the evolutionary trajectories in cancer progression 434
CABeRNET: A Cytoscape app for augmented Boolean models of gene regulatory NETworks 432
LACE: Inference of cancer evolution models from longitudinal single-cell sequencing data 431
Cognac: A chaste plugin for the multiscale simulation of gene regulatory networks driving the spatial dynamics of tissues and cancer 427
Parameter sensitivity analysis of stochastic models: Application to catalytic reaction networks 421
PMCE: efficient inference of expressive models of cancer evolution with high prognostic power 412
VERSO: a comprehensive framework for the inference of robust phylogenies and the quantification of intra-host genomic diversity of viral samples 410
cyTRON and cytron/js: Two cytoscape-based applications for the inference of cancer evolution models 408
Variant calling from scRNA-seq data allows the assessment of cellular identity in patient-derived cell lines 397
Pathway-based classification of breast cancer subtypes 390
Ordering cancer mutational profiles of cross-sectional copy number alterations 387
Large-Scale Analysis of SARS-CoV-2 Synonymous Mutations Reveals the Adaptation to the Human Codon Usage During the Virus Evolution 384
A Computational Framework To Infer The Order Of Accumulating Mutations In Individual Tumors 383
Inferring Tree Causal Models of Cancer Progression with Probability Raising 377
Combining multi-target regression deep neural networks and kinetic modeling to predict relative fluxes in reaction systems 359
VirMutSig: Discovery and assignment of viral mutational signatures from sequencing data 354
A computational framework to infer the order of accumulating mutations in individual tumors 351
LACE 2.0: an interactive R tool for the inference and visualization of longitudinal cancer evolution 347
A Bayesian method to infer copy number clones from single-cell RNA and ATAC sequencing 341
Modeling Spatio-Temporal Dynamics of Metabolic Networks with Cellular Automata and Constraint-Based Methods 335
Characterization of SARS-CoV-2 Mutational Signatures from 1.5+ Million Raw Sequencing Samples 325
Mutational signatures and heterogeneous host response revealed via large-scale characterization of SARS-CoV-2 genomic diversity 320
OG-SPACE: Optimized Stochastic Simulation of Spatial Models of Cancer Evolution 319
Early tolerance and late persistence as alternative drug responses in cancer 315
Evolutionary signatures of human cancers revealed via genomic analysis of over 35,000 patients 314
Distributed delays in a hybrid model of tumor-Immune system interplay 307
Analysis of the spatial and dynamical properties of a multiscale model of intestinal crypts 306
GeStoDifferent: A Cytoscape plugin for the generation and the identification of gene regulatory networks describing a stochastic cell differentiation process 300
Early detection and improved genomic surveillance of SARS-CoV-2 variants from deep sequencing data 293
Unity is strength: Improving the detection of adversarial examples with ensemble approaches 289
Chemotherapy after PD-1 inhibitors in relapsed/refractory Hodgkin lymphoma: Outcomes and clonal evolution dynamics 281
Characterization of cancer subtypes associated with clinical outcomes by multi-omics integrative clustering 276
Recent developments in research on catalytic reaction networks 276
Comprehensive analysis of mutational processes across 20 000 adult and pediatric tumors 272
A model of protocell based on the introduction of a semi-permeable membrane in a stochastic model of catalytic reaction networks 270
Investigating the relation between stochastic differentiation and homeostasis in intestinal crypts via multiscale modeling 265
Spatial flux balance analysis reveals region-specific cancer metabolic rewiring and metastatic mimicking 263
Ordering copy number alteration data to analyze colorectal cancer progression 256
Investigating the Role of Network Topology and Dynamical Regimes on the Dynamics of a Cell Differentiation Model 256
The immune cell dynamics in the peripheral blood of cHL patients receiving anti-PD1 treatment 255
Spatial Flux Balance Analysis reveals region-specific cancer metabolic rewiring and metastatic mimicking 254
SparseSignatures: An R package using LASSO-regularized non-negative matrix factorization to identify mutational signatures from human tumor samples 247
On RAF Sets and Autocatalytic Cycles in Random Reaction Networks 233
Natural Computing: Preface 232
Growth and division in a dynamic protocell model 221
How critical random boolean networks may be affected by the interaction with others 217
A stochastic model of autocatalytic reaction networks 215
A stochastic model of the emergence of autocatalytic cycles 215
Preface - Proc. Wivace 2013 - Italian Workshop on Artificial Life and Evolutionary Computation 214
Dynamical properties of a Boolean model of gene regulatory network with memory 207
Inferring causal models of cancer progression with a shrinkage estimator and probability raising 206
A stochastic model of catalytic reaction networks in protocells 206
The detection of dynamical organization in cancer evolution models 206
Exploring the Solution Space of Cancer Evolution Inference Frameworks for Single-Cell Sequencing Data 200
A review of spatial computational models for multi-cellular systems, with regard to intestinal crypts and colorectal cancer development 197
Effects of delayed immune-response in tumor immune-system interplay 197
The role of backward reactions in a stochastic model of catalytic reaction networks 192
The diffusion of perturbations in a model of coupled random boolean networks 191
A multiscale model of intestinal crypts dynamics 189
The influence of different kinetic rates on the dynamics of a simple model of catalytic reaction network 177
The simulation of gene knock-out in scale-free random boolean models of genetic networks 173
Robustness analysis of a boolean model of gene regulatory network with memory 171
Methods, computer-accessible medium and systems to model disease progression using biomedical data from multiple patients 170
Investigating Cell Criticality 169
Why a simple model of genetic regulatory networks describes the distribution of avalanches in gene expression data 166
The role of energy in a stochastic model of the emergence of autocatalytic sets 165
MaREA: Metabolic feature extraction, enrichment and visualization of RNAseq data 162
The influence of the residence time on the dynamics of catalytic reaction networks of molecules 160
Comunicazione cellulare, livelli e strutture ordinate 140
Two-Level Detection of Dynamic Organization in Cancer Evolution Models 133
Epigenetic Heritability of Cell Plasticity Drives Cancer Drug Resistance through a One-to-Many Genotype-to-Phenotype Paradigm 91
Prognostic Score for Myelodysplastic Syndromes Based on Molecular Evolution 34
Spatial FBA reveals heterogeneous Warburg niches in renal tumors and lactate consumption in colorectal cancer 32
Totale 33.865
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Categoria #
all - tutte 99.176
article - articoli 0
book - libri 0
conference - conferenze 0
curatela - curatele 0
other - altro 0
patent - brevetti 0
selected - selezionate 0
volume - volumi 0
Totale 99.176
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Totale Lug Ago Sett Ott Nov Dic Gen Feb Mar Apr Mag Giu
2021/20224.678 404 360 394 348 296 406 502 429 328 322 444 445
2022/20234.001 685 984 559 559 320 314 67 145 183 82 69 34
2023/20242.107 73 113 175 75 206 514 446 92 105 44 48 216
2024/20254.519 189 320 391 246 288 169 255 318 459 664 478 742
2025/202610.359 1.082 707 1.047 1.107 995 508 1.405 423 827 981 738 539
2026/2027222 222 0 0 0 0 0 0 0 0 0 0 0
Totale 33.865