Bicocca Open Archive

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GRAUDENZI, ALEX
 Distribuzione geografica
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Continente #
NA - Nord America 11.737
EU - Europa 6.048
AS - Asia 1.757
SA - Sud America 13
Continente sconosciuto - Info sul continente non disponibili 7
AF - Africa 6
OC - Oceania 6
Totale 19.574
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Nazione #
US - Stati Uniti d'America 11.592
DE - Germania 2.160
IT - Italia 1.675
CN - Cina 663
IE - Irlanda 578
SG - Singapore 551
SE - Svezia 502
RU - Federazione Russa 317
UA - Ucraina 212
VN - Vietnam 181
HK - Hong Kong 149
GB - Regno Unito 146
CA - Canada 142
DK - Danimarca 125
FI - Finlandia 82
ID - Indonesia 68
FR - Francia 58
IN - India 54
CH - Svizzera 53
NL - Olanda 42
TR - Turchia 38
BE - Belgio 32
IR - Iran 20
JP - Giappone 13
PL - Polonia 11
AT - Austria 10
ES - Italia 10
CZ - Repubblica Ceca 7
BR - Brasile 6
CL - Cile 5
EU - Europa 5
HU - Ungheria 5
KR - Corea 5
PH - Filippine 5
AU - Australia 4
GR - Grecia 4
LU - Lussemburgo 3
MX - Messico 3
TH - Thailandia 3
EC - Ecuador 2
MK - Macedonia 2
NZ - Nuova Zelanda 2
RO - Romania 2
SC - Seychelles 2
A1 - Anonimo 1
A2 - ???statistics.table.value.countryCode.A2??? 1
BA - Bosnia-Erzegovina 1
BD - Bangladesh 1
BG - Bulgaria 1
DZ - Algeria 1
EE - Estonia 1
EG - Egitto 1
GN - Guinea 1
IL - Israele 1
IS - Islanda 1
KW - Kuwait 1
KZ - Kazakistan 1
LA - Repubblica Popolare Democratica del Laos 1
LI - Liechtenstein 1
LT - Lituania 1
LV - Lettonia 1
MA - Marocco 1
MD - Moldavia 1
NO - Norvegia 1
PT - Portogallo 1
SA - Arabia Saudita 1
SI - Slovenia 1
SK - Slovacchia (Repubblica Slovacca) 1
TW - Taiwan 1
Totale 19.574
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Città #
Ann Arbor 5.712
Frankfurt am Main 2.045
Fairfield 672
Chandler 576
Dublin 567
Woodbridge 549
Milan 548
Wilmington 536
Ashburn 501
Singapore 447
Houston 336
Seattle 272
New York 218
Cambridge 212
Dearborn 203
Jacksonville 200
Princeton 161
Santa Clara 151
Hong Kong 143
Dong Ket 128
Boardman 122
Nanjing 119
Assago 113
Shanghai 113
Toronto 75
Jakarta 68
Lawrence 64
Beijing 62
San Diego 57
Guangzhou 45
Altamura 41
Sacramento 40
Romola 37
Lachine 35
Nanchang 35
Andover 34
Rome 28
Brussels 27
Helsinki 27
Jinan 27
Tianjin 26
Sesto San Giovanni 23
Zhengzhou 23
Monza 22
Ottawa 22
Shenyang 22
Fremont 21
Hebei 20
Munich 16
Dallas 15
Hangzhou 15
Ningbo 15
Falls Church 14
Lappeenranta 14
Leiden 14
Los Angeles 14
Melzo 14
Turin 14
Changsha 13
Washington 13
Ardea 12
Bologna 12
Lugano 12
Cernobbio 11
Taizhou 11
Florence 10
Jiaxing 10
Kunming 10
London 10
Genoa 9
Lissone 9
Mugnano Di Napoli 9
Norwalk 9
Como 8
Corbetta 8
Mountain View 8
Napoli 8
Parma 8
Segrate 8
Trieste 8
Triuggio 8
Breganzona 7
Carate Brianza 7
Duncan 7
Phoenix 7
Pregassona 7
Tokyo 7
Valenza 7
Arese 6
Balerna 6
Desio 6
Kiev 6
Kocaeli 6
Leawood 6
Redmond 6
Seveso 6
Torino 6
Vienna 6
Amsterdam 5
Atlanta 5
Totale 16.013
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Nome #
MaREA4Galaxy: metabolic reaction enrichment analysis and visualization of RNA-seq data within Galaxy 512
Synchronization effects in a metabolism-driven model of multi-cellular system 501
Integration of single-cell RNA-seq data into population models to characterize cancer metabolism 484
Integration of transcriptomic data and metabolic networks in cancer samples reveals highly significant prognostic power 471
Longitudinal cancer evolution from single cells 456
FBCA, A multiscale modeling framework combining cellular automata and flux balance analysis 443
null 441
Personalized therapy design for liquid tumors via optimal control theory 440
The Influence of Nutrients Diffusion on a Metabolism-driven Model of a Multi-cellular System 439
Learning mutational graphs of individual tumour evolution from single-cell and multi-region sequencing data 412
Characterization of intra-host SARS-CoV-2 variants improves phylogenomic reconstruction and may reveal functionally convergent mutations 406
A review of computational strategies for denoising and imputation of single-cell transcriptomic data 389
CAPRI: Efficient Inference of Cancer Progression Models from Cross-sectional Data 379
Integration of single-cell RNA-sequencing data into flux balance cellular automata 371
TRONCO: An R package for the inference of cancer progression models from heterogeneous genomic data 370
Modeling cumulative biological phenomena with Suppes-Bayes causal networks 368
VERSO: a comprehensive framework for the inference of robust phylogenies and the quantification of intra-host genomic diversity of viral samples 353
Design of the TRONCO bioconductor package for TRanslational ONCOlogy 352
Investigating the Compositional Structure Of Deep Neural Networks 348
Efficient computational strategies to learn the structure of probabilistic graphical models of cumulative phenomena 342
Algorithmic methods to infer the evolutionary trajectories in cancer progression 340
SpidermiR: An R/bioconductor package for integrative analysis with miRNA data 332
Structural Learning of Probabilistic Graphical Models of Cumulative Phenomena 332
cyTRON and cyTRON/JS: two Cytoscape-based applications for the inference of cancer evolution models 321
VERSO: a comprehensive framework for the inference of robust phylogenies and the quantification of intra-host genomic diversity of viral samples 316
An Optimal Control Framework for the Automated Design of Personalized Cancer Treatments 313
CABeRNET: A Cytoscape app for augmented Boolean models of gene regulatory NETworks 311
A closed-loop optimization framework for personalized cancer therapy design 309
Pathway-based classification of breast cancer subtypes 303
Understanding deep learning with activation pattern diagrams 290
Cognac: A chaste plugin for the multiscale simulation of gene regulatory networks driving the spatial dynamics of tissues and cancer 285
A Computational Framework To Infer The Order Of Accumulating Mutations In Individual Tumors 285
Ordering cancer mutational profiles of cross-sectional copy number alterations 282
On the use of topological features of metabolic networks for the classification of cancer samples 271
A computational framework to infer the order of accumulating mutations in individual tumors 249
LACE: Inference of cancer evolution models from longitudinal single-cell sequencing data 242
Modeling Spatio-Temporal Dynamics of Metabolic Networks with Cellular Automata and Constraint-Based Methods 240
Variant calling from scRNA-seq data allows the assessment of cellular identity in patient-derived cell lines 225
VirMutSig: Discovery and assignment of viral mutational signatures from sequencing data 223
Combining multi-target regression deep neural networks and kinetic modeling to predict relative fluxes in reaction systems 213
Inferring Tree Causal Models of Cancer Progression with Probability Raising 207
PMCE: efficient inference of expressive models of cancer evolution with high prognostic power 197
Large-Scale Analysis of SARS-CoV-2 Synonymous Mutations Reveals the Adaptation to the Human Codon Usage During the Virus Evolution 190
Recent developments in research on catalytic reaction networks 187
A model of protocell based on the introduction of a semi-permeable membrane in a stochastic model of catalytic reaction networks 187
Distributed delays in a hybrid model of tumor-Immune system interplay 185
GeStoDifferent: A Cytoscape plugin for the generation and the identification of gene regulatory networks describing a stochastic cell differentiation process 184
Analysis of the spatial and dynamical properties of a multiscale model of intestinal crypts 184
Investigating the Role of Network Topology and Dynamical Regimes on the Dynamics of a Cell Differentiation Model 180
OG-SPACE: Optimized Stochastic Simulation of Spatial Models of Cancer Evolution 178
On RAF Sets and Autocatalytic Cycles in Random Reaction Networks 163
Mutational signatures and heterogeneous host response revealed via large-scale characterization of SARS-CoV-2 genomic diversity 159
Effects of delayed immune-response in tumor immune-system interplay 148
Preface - Proc. Wivace 2013 - Italian Workshop on Artificial Life and Evolutionary Computation 147
Dynamical properties of a Boolean model of gene regulatory network with memory 141
Investigating the relation between stochastic differentiation and homeostasis in intestinal crypts via multiscale modeling 140
Ordering copy number alteration data to analyze colorectal cancer progression 139
A stochastic model of the emergence of autocatalytic cycles 139
How critical random boolean networks may be affected by the interaction with others 137
Chemotherapy after PD-1 inhibitors in relapsed/refractory Hodgkin lymphoma: Outcomes and clonal evolution dynamics 137
Inferring causal models of cancer progression with a shrinkage estimator and probability raising 133
A stochastic model of autocatalytic reaction networks 133
Growth and division in a dynamic protocell model 130
Parameter sensitivity analysis of stochastic models: Application to catalytic reaction networks 130
The diffusion of perturbations in a model of coupled random boolean networks 125
The role of backward reactions in a stochastic model of catalytic reaction networks 123
Natural Computing: Preface 122
A review of spatial computational models for multi-cellular systems, with regard to intestinal crypts and colorectal cancer development 121
A multiscale model of intestinal crypts dynamics 120
A stochastic model of catalytic reaction networks in protocells 112
J-SPACE: a Julia package for the simulation of spatial models of cancer evolution and of sequencing experiments 111
The simulation of gene knock-out in scale-free random boolean models of genetic networks 110
The detection of dynamical organization in cancer evolution models 108
LACE 2.0: an interactive R tool for the inference and visualization of longitudinal cancer evolution 106
Investigating Cell Criticality 106
The influence of different kinetic rates on the dynamics of a simple model of catalytic reaction network 104
Why a simple model of genetic regulatory networks describes the distribution of avalanches in gene expression data 102
Robustness analysis of a boolean model of gene regulatory network with memory 99
Early detection and improved genomic surveillance of SARS-CoV-2 variants from deep sequencing data 97
SparseSignatures: An R package using LASSO-regularized non-negative matrix factorization to identify mutational signatures from human tumor samples 94
The influence of the residence time on the dynamics of catalytic reaction networks of molecules 93
Unity is strength: Improving the detection of adversarial examples with ensemble approaches 91
Methods, computer-accessible medium and systems to model disease progression using biomedical data from multiple patients 90
The role of energy in a stochastic model of the emergence of autocatalytic sets 89
Characterization of SARS-CoV-2 Mutational Signatures from 1.5+ Million Raw Sequencing Samples 88
Evolutionary signatures of human cancers revealed via genomic analysis of over 35,000 patients 76
Characterization of cancer subtypes associated with clinical outcomes by multi-omics integrative clustering 70
Comunicazione cellulare, livelli e strutture ordinate 70
Exploring the Solution Space of Cancer Evolution Inference Frameworks for Single-Cell Sequencing Data 50
A Bayesian method to infer copy number clones from single-cell RNA and ATAC sequencing 40
MaREA: Metabolic feature extraction, enrichment and visualization of RNAseq data 20
Totale 20.351
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Categoria #
all - tutte 62.254
article - articoli 0
book - libri 0
conference - conferenze 0
curatela - curatele 0
other - altro 0
patent - brevetti 0
selected - selezionate 0
volume - volumi 0
Totale 62.254
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Totale Lug Ago Sett Ott Nov Dic Gen Feb Mar Apr Mag Giu
2019/20201.551 0 0 0 0 0 272 356 247 239 193 158 86
2020/20213.338 72 135 216 256 218 239 240 282 402 406 373 499
2021/20224.678 404 360 394 348 296 406 502 429 328 322 444 445
2022/20234.001 685 984 559 559 320 314 67 145 183 82 69 34
2023/20242.107 73 113 175 75 206 514 446 92 105 44 48 216
2024/20251.586 189 320 391 246 288 152 0 0 0 0 0 0
Totale 20.351