Bicocca Open Archive

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GRAUDENZI, ALEX
 Distribuzione geografica
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Continente #
NA - Nord America 18.654
EU - Europa 8.679
AS - Asia 6.900
SA - Sud America 974
Continente sconosciuto - Info sul continente non disponibili 838
AF - Africa 177
OC - Oceania 15
Totale 36.237
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Nazione #
US - Stati Uniti d'America 17.874
IT - Italia 2.811
SG - Singapore 2.444
DE - Germania 2.359
CN - Cina 1.498
VN - Vietnam 1.019
RU - Federazione Russa 797
HK - Hong Kong 747
BR - Brasile 743
CA - Canada 655
SE - Svezia 606
IE - Irlanda 582
GB - Regno Unito 267
UA - Ucraina 243
FR - Francia 227
IN - India 220
BD - Bangladesh 213
CH - Svizzera 157
DK - Danimarca 131
FI - Finlandia 112
TR - Turchia 105
ID - Indonesia 102
AR - Argentina 91
NL - Olanda 88
KR - Corea 86
ES - Italia 72
IQ - Iraq 70
ZA - Sudafrica 69
JP - Giappone 68
AT - Austria 63
MX - Messico 57
PK - Pakistan 49
PL - Polonia 46
SA - Arabia Saudita 45
PH - Filippine 38
BE - Belgio 35
CO - Colombia 33
EC - Ecuador 29
VE - Venezuela 27
UZ - Uzbekistan 23
IR - Iran 22
KE - Kenya 20
PY - Paraguay 19
CL - Cile 17
JO - Giordania 17
MA - Marocco 17
MY - Malesia 15
IL - Israele 14
TN - Tunisia 14
AU - Australia 13
CR - Costa Rica 13
LT - Lituania 13
AE - Emirati Arabi Uniti 12
EG - Egitto 12
JM - Giamaica 12
ET - Etiopia 11
CZ - Repubblica Ceca 10
NP - Nepal 10
LB - Libano 9
OM - Oman 9
PS - Palestinian Territory 9
TH - Thailandia 9
DO - Repubblica Dominicana 8
QA - Qatar 8
BG - Bulgaria 7
PE - Perù 7
SY - Repubblica araba siriana 7
TW - Taiwan 7
DZ - Algeria 6
GR - Grecia 6
HU - Ungheria 6
LU - Lussemburgo 6
RO - Romania 6
EU - Europa 5
HN - Honduras 5
AL - Albania 4
AO - Angola 4
AZ - Azerbaigian 4
CI - Costa d'Avorio 4
GE - Georgia 4
GT - Guatemala 4
KZ - Kazakistan 4
SV - El Salvador 4
TT - Trinidad e Tobago 4
AM - Armenia 3
BA - Bosnia-Erzegovina 3
BO - Bolivia 3
BS - Bahamas 3
LV - Lettonia 3
MD - Moldavia 3
MU - Mauritius 3
NG - Nigeria 3
NI - Nicaragua 3
NO - Norvegia 3
UY - Uruguay 3
EE - Estonia 2
KH - Cambogia 2
LA - Repubblica Popolare Democratica del Laos 2
LC - Santa Lucia 2
MK - Macedonia 2
Totale 35.361
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Città #
Ann Arbor 5.717
Frankfurt am Main 2.080
Ashburn 1.470
Singapore 1.287
Milan 926
San Jose 859
Dallas 734
Hong Kong 723
Fairfield 672
Chandler 577
Dublin 570
Woodbridge 550
Wilmington 544
Toronto 435
Houston 361
New York 355
Los Angeles 292
Seattle 284
Council Bluffs 245
Ho Chi Minh City 230
Beijing 224
Cambridge 213
Hanoi 213
Santa Clara 212
Dearborn 203
Jacksonville 203
Chicago 176
Staranzano 169
Princeton 164
Boardman 149
Hefei 144
The Dalles 141
Dong Ket 128
Shanghai 126
Nanjing 123
Assago 113
Rome 110
Buffalo 107
Columbus 105
Montreal 99
Moscow 83
Lauterbourg 82
São Paulo 81
Seoul 77
Jakarta 73
Nuremberg 69
Lawrence 65
San Diego 59
Rümlang 58
Guangzhou 55
Phoenix 54
Munich 53
Tokyo 53
Kent 50
Denver 48
Orem 48
Atlanta 47
Turin 46
Sacramento 43
Altamura 41
Brooklyn 41
Romola 37
London 36
Nanchang 36
Lachine 35
Monza 35
Andover 34
Zurich 34
Baghdad 32
Warsaw 32
Da Nang 31
Helsinki 31
Brussels 30
Chennai 30
Jinan 30
Tianjin 29
Zhengzhou 29
Haiphong 28
Johannesburg 28
Redondo Beach 27
San Francisco 27
Ankara 26
Rio de Janeiro 26
Sesto San Giovanni 25
Vienna 25
Stockholm 24
Barcelona 23
Bologna 23
Ottawa 23
Shenyang 23
Amsterdam 22
Washington 22
Fremont 21
Jeddah 21
Changsha 20
Figino 20
Hangzhou 20
Hebei 20
Lappeenranta 20
Dhaka 19
Totale 24.313
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Nome #
MaREA4Galaxy: metabolic reaction enrichment analysis and visualization of RNA-seq data within Galaxy 750
Integration of single-cell RNA-seq data into population models to characterize cancer metabolism 726
Integration of transcriptomic data and metabolic networks in cancer samples reveals highly significant prognostic power 673
Synchronization effects in a metabolism-driven model of multi-cellular system 660
Longitudinal cancer evolution from single cells 639
The Influence of Nutrients Diffusion on a Metabolism-driven Model of a Multi-cellular System 632
A review of computational strategies for denoising and imputation of single-cell transcriptomic data 615
FBCA, A multiscale modeling framework combining cellular automata and flux balance analysis 613
Characterization of intra-host SARS-CoV-2 variants improves phylogenomic reconstruction and may reveal functionally convergent mutations 600
Personalized therapy design for liquid tumors via optimal control theory 576
VERSO: a comprehensive framework for the inference of robust phylogenies and the quantification of intra-host genomic diversity of viral samples 552
Learning mutational graphs of individual tumour evolution from single-cell and multi-region sequencing data 551
Integration of single-cell RNA-sequencing data into flux balance cellular automata 540
CAPRI: Efficient Inference of Cancer Progression Models from Cross-sectional Data 527
Modeling cumulative biological phenomena with Suppes-Bayes causal networks 526
TRONCO: An R package for the inference of cancer progression models from heterogeneous genomic data 525
A closed-loop optimization framework for personalized cancer therapy design 510
An Optimal Control Framework for the Automated Design of Personalized Cancer Treatments 508
Investigating the Compositional Structure Of Deep Neural Networks 504
Variant calling from scRNA-seq data allows the assessment of cellular identity in patient-derived cell lines 496
Understanding deep learning with activation pattern diagrams 491
Design of the TRONCO bioconductor package for TRanslational ONCOlogy 474
J-SPACE: a Julia package for the simulation of spatial models of cancer evolution and of sequencing experiments 469
On the use of topological features of metabolic networks for the classification of cancer samples 469
SpidermiR: An R/bioconductor package for integrative analysis with miRNA data 468
LACE: Inference of cancer evolution models from longitudinal single-cell sequencing data 462
CABeRNET: A Cytoscape app for augmented Boolean models of gene regulatory NETworks 458
Efficient computational strategies to learn the structure of probabilistic graphical models of cumulative phenomena 458
MaREA: Metabolic feature extraction, enrichment and visualization of RNAseq data 457
Structural Learning of Probabilistic Graphical Models of Cumulative Phenomena 455
Algorithmic methods to infer the evolutionary trajectories in cancer progression 453
PMCE: efficient inference of expressive models of cancer evolution with high prognostic power 451
Cognac: A chaste plugin for the multiscale simulation of gene regulatory networks driving the spatial dynamics of tissues and cancer 445
Parameter sensitivity analysis of stochastic models: Application to catalytic reaction networks 435
VERSO: a comprehensive framework for the inference of robust phylogenies and the quantification of intra-host genomic diversity of viral samples 423
cyTRON and cytron/js: Two cytoscape-based applications for the inference of cancer evolution models 420
Large-Scale Analysis of SARS-CoV-2 Synonymous Mutations Reveals the Adaptation to the Human Codon Usage During the Virus Evolution 412
Pathway-based classification of breast cancer subtypes 403
Ordering cancer mutational profiles of cross-sectional copy number alterations 401
Inferring Tree Causal Models of Cancer Progression with Probability Raising 395
A Computational Framework To Infer The Order Of Accumulating Mutations In Individual Tumors 395
VirMutSig: Discovery and assignment of viral mutational signatures from sequencing data 390
Combining multi-target regression deep neural networks and kinetic modeling to predict relative fluxes in reaction systems 383
LACE 2.0: an interactive R tool for the inference and visualization of longitudinal cancer evolution 379
Early tolerance and late persistence as alternative drug responses in cancer 373
A Bayesian method to infer copy number clones from single-cell RNA and ATAC sequencing 363
A computational framework to infer the order of accumulating mutations in individual tumors 362
Modeling Spatio-Temporal Dynamics of Metabolic Networks with Cellular Automata and Constraint-Based Methods 362
Epigenetic Heritability of Cell Plasticity Drives Cancer Drug Resistance through a One-to-Many Genotype-to-Phenotype Paradigm 347
Characterization of SARS-CoV-2 Mutational Signatures from 1.5+ Million Raw Sequencing Samples 346
Mutational signatures and heterogeneous host response revealed via large-scale characterization of SARS-CoV-2 genomic diversity 346
OG-SPACE: Optimized Stochastic Simulation of Spatial Models of Cancer Evolution 342
Evolutionary signatures of human cancers revealed via genomic analysis of over 35,000 patients 335
Distributed delays in a hybrid model of tumor-Immune system interplay 328
Analysis of the spatial and dynamical properties of a multiscale model of intestinal crypts 324
Unity is strength: Improving the detection of adversarial examples with ensemble approaches 320
Early detection and improved genomic surveillance of SARS-CoV-2 variants from deep sequencing data 318
GeStoDifferent: A Cytoscape plugin for the generation and the identification of gene regulatory networks describing a stochastic cell differentiation process 315
Chemotherapy after PD-1 inhibitors in relapsed/refractory Hodgkin lymphoma: Outcomes and clonal evolution dynamics 312
Comprehensive analysis of mutational processes across 20 000 adult and pediatric tumors 308
Characterization of cancer subtypes associated with clinical outcomes by multi-omics integrative clustering 302
Spatial flux balance analysis reveals region-specific cancer metabolic rewiring and metastatic mimicking 300
The immune cell dynamics in the peripheral blood of cHL patients receiving anti-PD1 treatment 300
Spatial Flux Balance Analysis reveals region-specific cancer metabolic rewiring and metastatic mimicking 285
Recent developments in research on catalytic reaction networks 285
Investigating the relation between stochastic differentiation and homeostasis in intestinal crypts via multiscale modeling 284
A model of protocell based on the introduction of a semi-permeable membrane in a stochastic model of catalytic reaction networks 280
SparseSignatures: An R package using LASSO-regularized non-negative matrix factorization to identify mutational signatures from human tumor samples 273
Investigating the Role of Network Topology and Dynamical Regimes on the Dynamics of a Cell Differentiation Model 269
Ordering copy number alteration data to analyze colorectal cancer progression 265
Natural Computing: Preface 248
On RAF Sets and Autocatalytic Cycles in Random Reaction Networks 243
Growth and division in a dynamic protocell model 237
A stochastic model of autocatalytic reaction networks 230
The detection of dynamical organization in cancer evolution models 230
How critical random boolean networks may be affected by the interaction with others 228
A stochastic model of the emergence of autocatalytic cycles 227
Exploring the Solution Space of Cancer Evolution Inference Frameworks for Single-Cell Sequencing Data 226
Preface - Proc. Wivace 2013 - Italian Workshop on Artificial Life and Evolutionary Computation 223
A stochastic model of catalytic reaction networks in protocells 217
Dynamical properties of a Boolean model of gene regulatory network with memory 213
A review of spatial computational models for multi-cellular systems, with regard to intestinal crypts and colorectal cancer development 211
Inferring causal models of cancer progression with a shrinkage estimator and probability raising 211
The role of backward reactions in a stochastic model of catalytic reaction networks 209
Effects of delayed immune-response in tumor immune-system interplay 209
The diffusion of perturbations in a model of coupled random boolean networks 202
A multiscale model of intestinal crypts dynamics 200
The influence of different kinetic rates on the dynamics of a simple model of catalytic reaction network 191
Investigating Cell Criticality 185
Robustness analysis of a boolean model of gene regulatory network with memory 183
Methods, computer-accessible medium and systems to model disease progression using biomedical data from multiple patients 181
The simulation of gene knock-out in scale-free random boolean models of genetic networks 180
Why a simple model of genetic regulatory networks describes the distribution of avalanches in gene expression data 177
The role of energy in a stochastic model of the emergence of autocatalytic sets 176
The influence of the residence time on the dynamics of catalytic reaction networks of molecules 168
Two-Level Detection of Dynamic Organization in Cancer Evolution Models 157
Comunicazione cellulare, livelli e strutture ordinate 155
Prognostic Score for Myelodysplastic Syndromes Based on Molecular Evolution 98
Spatial FBA reveals heterogeneous Warburg niches in renal tumors and lactate consumption in colorectal cancer 68
Spatial flux balance analysis reveals region-specific cancer metabolic rewiring and metastatic mimicking 49
Totale 36.145
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Categoria #
all - tutte 105.445
article - articoli 0
book - libri 0
conference - conferenze 0
curatela - curatele 0
other - altro 0
patent - brevetti 0
selected - selezionate 0
volume - volumi 0
Totale 105.445
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Totale Lug Ago Sett Ott Nov Dic Gen Feb Mar Apr Mag Giu
2021/20223.520 0 0 0 348 296 406 502 429 328 322 444 445
2022/20234.001 685 984 559 559 320 314 67 145 183 82 69 34
2023/20242.103 73 113 175 75 206 514 446 92 105 44 47 213
2024/20254.462 187 317 387 245 282 169 250 316 450 654 469 736
2025/202610.259 1.072 702 1.037 1.095 984 503 1.392 420 817 975 724 538
2026/20272.755 420 866 1.310 159 0 0 0 0 0 0 0 0
Totale 36.237