Deciphering the influence of the interaction among the constituents of a complex system on the overall behaviour is one of the main goals of complex systems science. The model we present in this work is a 2D square cellular automaton whose of each cell is occupied by a complete random Boolean network. Random Boolean networks are a well-known simplified model of genetic regulatory networks and this model of interacting RBNs may be therefore regarded as a simplified model of a tissue or a monoclonal colony. The mechanism of cell-to-cell interaction is here simulated letting some nodes of a particular network being influenced by the state of some nodes belonging to its neighbouring cells. One possible means to investigate the overall dynamics of a complex system is studying its response to perturbations. Our analyses follow this methodological approach. Even though the dynamics of the system is far from trivial we could show in a clear way how the interaction affects the dynamics and the global degree of order. © 2008 Springer-Verlag Berlin Heidelberg.

Serra, R., Villani, M., Damiani, C., Graudenzi, A., Colacci, A. (2008). The diffusion of perturbations in a model of coupled random boolean networks. In Cellular Automata. (pp.315-322) [10.1007/978-3-540-79992-4_40].

The diffusion of perturbations in a model of coupled random boolean networks

Damiani, C;Graudenzi, A;
2008

Abstract

Deciphering the influence of the interaction among the constituents of a complex system on the overall behaviour is one of the main goals of complex systems science. The model we present in this work is a 2D square cellular automaton whose of each cell is occupied by a complete random Boolean network. Random Boolean networks are a well-known simplified model of genetic regulatory networks and this model of interacting RBNs may be therefore regarded as a simplified model of a tissue or a monoclonal colony. The mechanism of cell-to-cell interaction is here simulated letting some nodes of a particular network being influenced by the state of some nodes belonging to its neighbouring cells. One possible means to investigate the overall dynamics of a complex system is studying its response to perturbations. Our analyses follow this methodological approach. Even though the dynamics of the system is far from trivial we could show in a clear way how the interaction affects the dynamics and the global degree of order. © 2008 Springer-Verlag Berlin Heidelberg.
slide + paper
Cell-criticality; Cellular automaton; Genetic network model; Interaction; Random Boolean network; Theoretical Computer Science; Computer Science (all)
English
8th International Conference on Cellular Automata for Research and Industry, ACRI 2008
2008
Umeo, H; Morishiga, S; Nishinari, K; Komatsuzaki, T; Bandini, S
Cellular Automata.
2008
5191
315
322
none
Serra, R., Villani, M., Damiani, C., Graudenzi, A., Colacci, A. (2008). The diffusion of perturbations in a model of coupled random boolean networks. In Cellular Automata. (pp.315-322) [10.1007/978-3-540-79992-4_40].
File in questo prodotto:
Non ci sono file associati a questo prodotto.

I documenti in IRIS sono protetti da copyright e tutti i diritti sono riservati, salvo diversa indicazione.

Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/10281/186550
Citazioni
  • Scopus 20
  • ???jsp.display-item.citation.isi??? 17
Social impact