ANGARONI, FABRIZIO

ANGARONI, FABRIZIO  

DIPARTIMENTO DI INFORMATICA, SISTEMISTICA E COMUNICAZIONE  

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Titolo Tipologia Data di pubblicazione Autori File
Characterization of SARS-CoV-2 Mutational Signatures from 1.5+ Million Raw Sequencing Samples 01 - Articolo su rivista 2023 Aroldi, AndreaAngaroni, FabrizioD’Aliberti, DeborahSpinelli, SilviaCrespiatico, IlariaCrippa, ValentinaPiazza, RoccoGraudenzi, AlexRamazzotti, Daniele
Evolutionary signatures of human cancers revealed via genomic analysis of over 35,000 patients 01 - Articolo su rivista 2023 Fontana, DCrespiatico, ICrippa, VMalighetti, FVilla, MAngaroni, FAroldi, AAntoniotti, MCaravagna, GPiazza, RGraudenzi, AMologni, LRamazzotti, D +
Exploring the Solution Space of Cancer Evolution Inference Frameworks for Single-Cell Sequencing Data 02 - Intervento a convegno 2023 Davide MasperoFabrizio AngaroniLucrezia PatrunoDaniele RamazzottiAlex Graudenzi +
LACE 2.0: an interactive R tool for the inference and visualization of longitudinal cancer evolution 01 - Articolo su rivista 2023 Ascolani, GianlucaAngaroni, FabrizioMaspero, DavideCraighero, FrancescoPiazza, RoccoDamiani, ChiaraRamazzotti, DanieleAntoniotti, MarcoGraudenzi, Alex +
Early detection and improved genomic surveillance of SARS-CoV-2 variants from deep sequencing data 01 - Articolo su rivista 2022 Ramazzotti D.Maspero D.Angaroni F.Spinelli S.Antoniotti M.Piazza R.Graudenzi A.
J-SPACE: a Julia package for the simulation of spatial models of cancer evolution and of sequencing experiments 01 - Articolo su rivista 2022 Angaroni F.Guidi A.Ascolani G.Antoniotti M.Graudenzi A. +
LACE: Inference of cancer evolution models from longitudinal single-cell sequencing data 01 - Articolo su rivista 2022 Ramazzotti, DanieleAngaroni, FabrizioMaspero, DavideAscolani, GianlucaCastiglioni, IsabellaPiazza, RoccoAntoniotti, MarcoGraudenzi, Alex
Large-Scale Analysis of SARS-CoV-2 Synonymous Mutations Reveals the Adaptation to the Human Codon Usage During the Virus Evolution 01 - Articolo su rivista 2022 Ramazzotti, DanieleAngaroni, FabrizioMaspero, DavideMauri, MarioD’Aliberti, DeborahFontana, DilettaAntoniotti, MarcoElli, Elena MariaGraudenzi, AlexPiazza, Rocco
PMCE: efficient inference of expressive models of cancer evolution with high prognostic power 01 - Articolo su rivista 2022 Angaroni FDamiani CCaravagna GGraudenzi ARamazzotti D +
SparseSignatures: An R package using LASSO-regularized non-negative matrix factorization to identify mutational signatures from human tumor samples 01 - Articolo su rivista 2022 Angaroni F.Maspero D.Piazza R.Antoniotti M.Graudenzi A.Ramazzotti D. +
Variant calling from scRNA-seq data allows the assessment of cellular identity in patient-derived cell lines 01 - Articolo su rivista 2022 Ramazzotti, DanieleAngaroni, FabrizioMaspero, DavideAscolani, GianlucaCastiglioni, IsabellaPiazza, RoccoAntoniotti, MarcoGraudenzi, Alex
A review of computational strategies for denoising and imputation of single-cell transcriptomic data 01 - Articolo su rivista 2021 Patruno, LMaspero, DCraighero, FAngaroni, FAntoniotti, MGraudenzi, A
Mutational signatures and heterogeneous host response revealed via large-scale characterization of SARS-CoV-2 genomic diversity 01 - Articolo su rivista 2021 Graudenzi A.Maspero D.Angaroni F.Piazza R.Ramazzotti D.
OG-SPACE: Optimized Stochastic Simulation of Spatial Models of Cancer Evolution 99 - Altro 2021 Fabrizio AngaroniMarco AntoniottiAlex Graudenzi
On the use of topological features of metabolic networks for the classification of cancer samples 01 - Articolo su rivista 2021 Craighero, FrancescoMaspero, DavideAngaroni, FabrizioDamiani, ChiaraGraudenzi, AlexAntoniotti, Marco +
Optimal Control of a Discrete Time Stochastic Model of an Epidemic Spreading in Arbitrary Networks 02 - Intervento a convegno 2021 Angaroni, FDamiani, CAntoniotti, M +
VERSO: a comprehensive framework for the inference of robust phylogenies and the quantification of intra-host genomic diversity of viral samples 01 - Articolo su rivista 2021 Ramazzotti. , DanieleAngaroni, FabrizioMaspero, DavideGambacorti-Passerini, CarloAntoniotti, MarcoGraudenzi, AlexPiazza, Rocco
VirMutSig: Discovery and assignment of viral mutational signatures from sequencing data 01 - Articolo su rivista 2021 Maspero, DavideAngaroni, FabrizioPorro, DaniloPiazza, RoccoGraudenzi, AlexRamazzotti, Daniele
A closed-loop optimization framework for personalized cancer therapy design 02 - Intervento a convegno 2020 Angaroni, FabrizioPatruno, LucreziaMaspero, DavideAntoniotti, MarcoGraudenzi, Alex +
An Optimal Control Framework for the Automated Design of Personalized Cancer Treatments 01 - Articolo su rivista 2020 Angaroni, FabrizioGraudenzi, AlexMaspero, DavidePiazza, RoccoAntoniotti, Marco +