MASPERO, DAVIDE
MASPERO, DAVIDE
DIPARTIMENTO DI INFORMATICA, SISTEMISTICA E COMUNICAZIONE
popFBA: tackling intratumour heterogeneity with Flux Balance Analysis
2017 Damiani, C; Di Filippo, M; Pescini, D; Maspero, D; Colombo, R; Mauri, G
MaREA: Metabolic feature extraction, enrichment and visualization of RNAseq data
2018 Graudenzi, A; Maspero, D; Isella, C; Di Filippo, M; Mauri, G; Medico, E; Antoniotti, M; Damiani, C
Modeling Spatio-Temporal Dynamics of Metabolic Networks with Cellular Automata and Constraint-Based Methods
2018 Graudenzi, A; Maspero, D; Damiani, C
Integration of transcriptomic data and metabolic networks in cancer samples reveals highly significant prognostic power
2018 Graudenzi, A; Maspero, D; Di Filippo, M; Gnugnoli, M; Isella, C; Mauri, G; Medico, E; Antoniotti, M; Damiani, C
Cigarette smoke alters the transcriptome of non-involved lung tissue in lung adenocarcinoma patients
2019 Pintarelli, G; Noci, S; Maspero, D; Pettinicchio, A; Dugo, M; De Cecco, L; Incarbone, M; Tosi, D; Santambrogio, L; Dragani, T; Colombo, F
Synchronization effects in a metabolism-driven model of multi-cellular system
2019 Maspero, D; Graudenzi, A; AMARPAL SINGH, A; Pescini, D; Mauri, G; Antoniotti, M; Damiani, C
Personalized therapy design for liquid tumors via optimal control theory
2019 Angaroni, F; Graudenzi, A; Rossignolo, M; Maspero, D; Calarco, T; Piazza, R; Montangero, S; Antoniotti, M
Integration of single-cell RNA-seq data into population models to characterize cancer metabolism
2019 Damiani, C; Maspero, D; Di Filippo, M; Colombo, R; Pescini, D; Graudenzi, A; Westerhoff, H; Alberghina, L; Vanoni, M; Mauri, G
The Influence of Nutrients Diffusion on a Metabolism-driven Model of a Multi-cellular System
2019 Maspero, D; Damiani, C; Antoniotti, M; Graudenzi, A; Di Filippo, M; Vanoni, M; Caravagna, G; Colombo, R; Ramazzotti, D; Pescini, D
Longitudinal cancer evolution from single cells
2020 Ramazzotti, D; Angaroni, F; Maspero, D; Ascolani, G; Castiglioni, I; Piazza, R; Antoniotti, M; Graudenzi, A
Characterization of intra-host SARS-CoV-2 variants improves phylogenomic reconstruction and may reveal functionally convergent mutations
2020 Ramazzotti, D; Angaroni, F; Maspero, D; Gambacorti-Passerini, C; Antoniotti, M; Graudenzi, A; Piazza, R
An Optimal Control Framework for the Automated Design of Personalized Cancer Treatments
2020 Angaroni, F; Graudenzi, A; Rossignolo, M; Maspero, D; Calarco, T; Piazza, R; Montangero, S; Antoniotti, M
Read-through transcripts in lung: Germline genetic regulation and correlation with the expression of other genes
2020 Maspero, D; Dassano, A; Pintarelli, G; Noci, S; de Cecco, L; Incarbone, M; Tosi, D; Santambrogio, L; Dragani, T; Colombo, F
MaREA4Galaxy: metabolic reaction enrichment analysis and visualization of RNA-seq data using Galaxy
2020 Damiani, C; Rovida, L; Maspero, D; Sala, I; Rosato, L; Di Filippo, M; Pescini, D; Graudenzi, A; Antoniotti, M; Mauri, G
VERSO:A COMPREHENSIVE FRAMEWORK FOR THE INFERENCE OF ROBUST PHYLOGENIES AND THE QUANTIFICATION OF INTRA-HOST GENOMIC DIVERSITY OF VIRAL SAMPLES
2020 Ramazzotti, D; Angaroni, F; Maspero, D; Gambacorti-Passerini, C; Antoniotti, M; Graudenzi, A; Piazza, R
Single-cell digital twins for cancer preclinical investigation
2020 Di Filippo, M; Damiani, C; Vanoni, M; Maspero, D; Mauri, G; Alberghina, L; Pescini, D
A closed-loop optimization framework for personalized cancer therapy design
2020 Angaroni, F; Pennati, M; Patruno, L; Maspero, D; Antoniotti, M; Graudenzi, A
Integration of single-cell RNA-sequencing data into flux balance cellular automata
2020 Maspero, D; Di Filippo, M; Angaroni, F; Pescini, D; Mauri, G; Vanoni, M; Graudenzi, A; Damiani, C
FBCA, A multiscale modeling framework combining cellular automata and flux balance analysis
2020 Graudenzi, A; Maspero, D; Damiani, C
Mutational signatures and heterogeneous host response revealed via large-scale characterization of SARS-CoV-2 genomic diversity
2021 Graudenzi, A; Maspero, D; Angaroni, F; Piazza, R; Ramazzotti, D