Sfoglia per Autore
COBRAxy: constraint-based metabolic modeling in Galaxy
2026 Lapi, F; Milazzo, L; Lin, L; Rizzo, I; Galuzzi, B; Damiani, C
Spatial FBA reveals heterogeneous Warburg niches in renal tumors and lactate consumption in colorectal cancer
2026 Maspero, D; Marteletto, G; Lapi, F; Galuzzi, B; Ruano, I; Vandenbosch, B; Yin, K; Tejpar, S; Graudenzi, A; Heyn, H; Pascual-Reguant, A; Damiani, C
Spatial flux balance analysis reveals region-specific cancer metabolic rewiring and metastatic mimicking
2025 Maspero, D; Marteletto, G; Lapi, F; Galuzzi, B; Ruano, I; Vandenbosch, B; Yin, K; Tejpar, S; Graudenzi, A; Heyn, H; Pascual Reguant, A; Damiani, C
Multi-omics data analysis to characterize metabolic shifts during embryo development | BtBsDay2025
2025 Lapi, F; Milazzo, L; Galuzzi, B; Bertelli, F; Martello, G; Damiani, C
A Non-Canonical Tricarboxylic Acid Cycle Underlying Cellular Identity: An In Silico Perspective
2025 Lin, L; Saputo, F; Lapi, F; Isabella, R; Galuzzi, B; Vanoni, M; Damiani, C
Spatial Flux Balance Analysis reveals region-specific cancer metabolic rewiring and metastatic mimicking
2025 Maspero, D; Marteletto, G; Lapi, F; Galuzzi, B; Ruano, I; Vandenbosch, B; Yin, K; Tejpar, S; Graudenzi, A; Heyn, H; Pascual Reguant, A; Damiani, C
Multimodal analysis of tissue resident dendritic cells reveals the immunosuppressive role of DCs type 3 in human NSCLC and a mouse lung tumor model
2025 Rocca, G; Celant, A; Sonechkina, M; Stucchi, G; Galli, M; Cozzi, S; Marongiu, L; Marcandalli, E; Lapi, F; Donato, A; Protti, G; Damiani, C; Innocenti, M; Granucci, F
Single-cell analysis reveals distinct differentiation trajectories and immunoregulatory roles of DC3 subsets in NSCLC
2025 Sonechkina, M; Rocca, G; Lapi, F; Celant, A; Marcandalli, E; Galli, M; Cozzi, S; Stucchi, G; Marongiu, L; Donato, A; Protti, G; Innocenti, M; Damiani, C; Granucci, F
Mechanistically informed machine learning links non-canonical TCA cycle activity to Warburg metabolism and hallmarks of malignancy
2025 Lin, L; Lapi, F; Galuzzi, B; Vanoni, M; Alberghina, L; Damiani, C
Identifying Damage-Related Features in scRNA-seq Data
2025 Marteletto, G; Galuzzi, B; Damiani, C
Predicting Metalloprotein Redox Potentials with Machine Learning: A Focus on Iron–Sulfur Systems
2025 Persico, F; Galuzzi, B; Pellegrino, M; Claudel, A; De Gioia, L; Nastri, F; Gilardi, G; Damiani, C; Valetti, F; Chino, M; Arrigoni, F
Adjusting for false discoveries in constraint-based differential metabolic flux analysis
2024 Galuzzi, B; Milazzo, L; Damiani, C
Perspectives on computational modeling of biological systems and the significance of the SysMod community
2024 Puniya, B; Verma, M; Damiani, C; Bakr, S; Drager, A
scFBApy: A Python Framework for Super-Network Flux Balance Analysis
2024 Galuzzi, B; Damiani, C
Integrated visualization of metabolomics and transcriptomics with Galaxy
2024 Ferrari, M; Lapi, F; Penati, L; Vanoni, M; Galuzzi, B; Damiani, C
Multi-omics data analysis to characterize metabolic shifts during embryo development
2024 Lapi, F; Carbognin, E; Pensabene, E; Bertelli, F; Damiani, C
An Efficient Implementation of Flux Variability Analysis for Metabolic Networks
2023 Galuzzi, B; Damiani, C
Best Practices in Flux Sampling of Constrained-Based Models
2023 Galuzzi, B; Milazzo, L; Damiani, C
Unity is strength: Improving the detection of adversarial examples with ensemble approaches
2023 Craighero, F; Angaroni, F; Stella, F; Damiani, C; Antoniotti, M; Graudenzi, A
Coupling constrained-based flux sampling and clustering to tackle cancer metabolic heterogeneity
2023 Galuzzi, B; Izzo, S; Giampaolo, F; Cuomo, S; Vanoni, M; Alberghina, L; Damiani, C; Piccialli, F
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