Bicocca Open Archive

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BONATI, LAURA
 Distribuzione geografica
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Continente #
NA - Nord America 11.201
AS - Asia 6.194
EU - Europa 5.307
SA - Sud America 803
Continente sconosciuto - Info sul continente non disponibili 521
AF - Africa 148
OC - Oceania 13
Totale 24.187
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Nazione #
US - Stati Uniti d'America 10.599
SG - Singapore 2.105
IT - Italia 1.468
CN - Cina 1.362
DE - Germania 913
VN - Vietnam 783
HK - Hong Kong 732
RU - Federazione Russa 663
BR - Brasile 606
SE - Svezia 515
CA - Canada 511
IE - Irlanda 384
UA - Ucraina 344
GB - Regno Unito 256
IN - India 244
FR - Francia 237
ID - Indonesia 165
FI - Finlandia 136
BD - Bangladesh 131
KR - Corea 120
AR - Argentina 83
TR - Turchia 80
PL - Polonia 70
IQ - Iraq 58
PH - Filippine 55
ES - Italia 53
NL - Olanda 53
ZA - Sudafrica 53
JP - Giappone 51
MX - Messico 48
TH - Thailandia 48
MY - Malesia 46
PK - Pakistan 43
AT - Austria 38
DK - Danimarca 36
SA - Arabia Saudita 33
EC - Ecuador 29
BE - Belgio 28
CH - Svizzera 25
CO - Colombia 24
MA - Marocco 19
TN - Tunisia 19
UZ - Uzbekistan 19
CL - Cile 18
VE - Venezuela 18
JM - Giamaica 16
AE - Emirati Arabi Uniti 14
IR - Iran 13
ET - Etiopia 12
PT - Portogallo 12
PY - Paraguay 12
IL - Israele 11
JO - Giordania 11
NP - Nepal 11
AU - Australia 10
HU - Ungheria 10
KE - Kenya 10
EG - Egitto 9
CZ - Repubblica Ceca 8
AZ - Azerbaigian 7
HN - Honduras 7
KZ - Kazakistan 7
LK - Sri Lanka 7
PE - Perù 7
RO - Romania 7
DZ - Algeria 6
GR - Grecia 6
LT - Lituania 6
TW - Taiwan 6
BG - Bulgaria 5
CR - Costa Rica 5
EU - Europa 5
LV - Lettonia 5
MN - Mongolia 5
UY - Uruguay 5
HR - Croazia 4
NO - Norvegia 4
OM - Oman 4
PS - Palestinian Territory 4
RS - Serbia 4
AL - Albania 3
GT - Guatemala 3
NG - Nigeria 3
NZ - Nuova Zelanda 3
SK - Slovacchia (Repubblica Slovacca) 3
SY - Repubblica araba siriana 3
AM - Armenia 2
BB - Barbados 2
BH - Bahrain 2
BY - Bielorussia 2
DO - Repubblica Dominicana 2
GE - Georgia 2
KG - Kirghizistan 2
KW - Kuwait 2
LB - Libano 2
LU - Lussemburgo 2
MD - Moldavia 2
ML - Mali 2
MU - Mauritius 2
NI - Nicaragua 2
Totale 23.642
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Città #
Ann Arbor 1.537
Singapore 1.238
Ashburn 863
Hong Kong 710
San Jose 638
Woodbridge 638
Chandler 606
Fairfield 594
Milan 578
Frankfurt am Main 509
Houston 473
Dublin 368
Wilmington 365
Jacksonville 354
Toronto 324
Santa Clara 257
New York 247
Beijing 246
Dearborn 243
Seattle 234
Council Bluffs 214
Ho Chi Minh City 208
Cambridge 207
Los Angeles 204
Shanghai 169
Princeton 167
Hanoi 160
Chicago 145
Jakarta 129
Dallas 126
Hefei 125
The Dalles 120
Nanjing 116
Seoul 97
Dong Ket 78
Moscow 77
Lauterbourg 73
Boardman 71
Buffalo 70
Rome 69
São Paulo 64
Lachine 59
Helsinki 58
Munich 58
Altamura 54
Lawrence 52
Orem 43
San Diego 43
Washington 43
Bangkok 41
Ottawa 41
Warsaw 32
Andover 31
Da Nang 31
Denver 31
Columbus 30
Tianjin 30
Tokyo 30
Manila 29
Phoenix 29
Guangzhou 28
Johannesburg 28
Brooklyn 27
Kraków 27
Shenyang 27
Vienna 27
Atlanta 26
Baghdad 26
Brussels 26
Kuala Selangor 26
Pune 26
Edmonton 24
Haiphong 24
Nanchang 24
Newark 24
Falls Church 23
Fremont 23
London 23
Rio de Janeiro 23
Montreal 22
Philadelphia 22
Changsha 21
Hebei 21
Stockholm 21
Bologna 20
Manchester 20
Chennai 19
Jinan 19
Bari 18
Gavirate 18
Tashkent 18
Amsterdam 17
Biên Hòa 17
Jeddah 17
Jiaxing 17
Lahore 17
Mountain View 17
Poplar 16
San Francisco 16
Charlotte 15
Totale 15.346
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Nome #
Molecular modeling of the AhR structure and interactions can shed light on ligand-dependent activation and transformation mechanisms 558
Exploring the PXR ligand binding mechanism with advanced Molecular Dynamics methods 495
Modeling the binding of diverse ligands within the Ah receptor ligand binding domain 470
Functional annotation of the mesophilic-like character of mutants in a cold-adapted enzyme by self-organising map analysis of their molecular dynamics 439
Ligand-induced perturbation of the HIF-2α:ARNT dimer dynamics 436
Modeling Binding with Large Conformational Changes: Key Points in Ensemble-Docking Approaches 423
Role of dynamics in ligand-protein interactions: modelling of binding to the pregnane x receptor 393
Docking to homology models highlights the molecular determinants of ligand binding to the AhR 371
Mechanism of RGD-conjugated nanodevice binding to its target protein integrin αVβ3 by atomistic molecular dynamics and machine learning 364
NURA: A curated dataset of nuclear receptor modulators 352
No dance, no partner! A tale of receptor flexibility in docking and virtual screening 333
Complementarietà di metodi di modellistica molecolare e di bioinformatica strutturale nello studio di struttura e funzione di proteine 308
A selected bibliography on PCDD and PCDF formation 304
Design of gliadin peptide analogues with low affinity for the celiac disease associated HLA–DQ2 protein 299
Ginsenosides are novel naturally-occurring aryl hydrocarbon receptor ligands 298
A Neural Network Approach for the Identification of Pathways in Molecular Dynamics Simulations of Ligand Binding 288
Self organizing maps to efficiently cluster and functionally interpret protein conformational ensembles 286
ZADDOCK: incorporating ab initio search into HADDOCK 282
Chemometric approaches in environmental problems concerning PCDD and PCDF. Data interpretation and source correlation. Mechanisms of formation and destruction in MSW combustion process. 281
Study of ligand binding to HIF-2α through Path-Metadynamics 276
Metadynamics simulations for the investigation of drug loading on functionalized inorganic nanoparticles 275
Computational approaches to shed light on molecular mechanisms in biological processes 274
Detecting similarities among distant homologous proteins by comparison of domain flexibilities 273
Conformational and functional analysis of molecular dynamics trajectories by Self-Organising Maps 272
Comparative in vitro and in silico analysis of the selectivity of indirubin as a human ah receptor agonist 271
Mechanism of a nanodevice binding to its target protein by atomistic molecular dynamics: the case of RGD-conjugated PEGylated TiO2 nanoparticles binding to integrins αVβ3 270
Ligand binding and activation of the Ah receptor 268
AHR Ligands: Promiscuity in Binding and Diversity in Response 268
The combustion of Municipal Solid Wastes and PCDD and PCDF emissions. Part. 2 PCDD and PCDF in Stack Gases 264
Artificial Neural Networks for Efficient Clustering of Conformational Ensembles and their Potential for Medicinal Chemistry 264
Identification of potential aryl hydrocarbon receptor ligands by virtual screening of industrial chemicals 263
PathDetect-SOM: A Neural Network Approach for the Identification of Pathways in Ligand Binding Simulations 262
In vitro toxicity and in silico docking analysis of two novel selective AH-receptor modulators 261
Ligand docking in AhR homology model: specificity of structurally diverse ligands interactions 259
The combustion of Municipal Solid Wastes and PCDD and PCDF emissions. Part. 1 PCDD and PCDF in MSW 258
Structural modeling of the AhR:ARNT complex in the bHLH–PASA–PASB region elucidates the key determinants of dimerization 258
Structural and Functional Characterization of the Aryl Hydrocarbon Receptor Ligand Binding Domain by Homology Modeling and Mutational Analysis 257
Deciphering Dimerization Modes of PAS Domains: Computational and Experimental Analyses of the AhR:ARNT Complex Reveal New Insights Into the Mechanisms of AhR Transformation 252
Functional annotation of protein conformations by Self-Organizing Maps 251
Comparative Analysis of Homology Models of the Ah Receptor Ligand Binding Domain: Verification of Structure-Function Predictions by Site-Directed Mutagenesis of a Nonfunctional Receptor 250
The toxicity equivalency factor scheme applied to municipal incinerator PCDD/PCDF emissions when specific congener information is lacking 250
An aryl hydrocarbon receptor from the salamander ambystoma mexicanum exhibits low sensitivity to 2,3,7,8-tetrachlorodibenzo -p -dioxin 250
Conservation and specialization in PAS domain dynamics 248
Toward a mechanistic understanding of PCDD biological activity based on molecular electrostatic potential modeling 247
On the choice of the perturbed state for PMO prediction of selectivities in cycloaddition reactions 246
Predicting the accuracy of protein-ligand docking on homology models 244
Mechanism of Ligand-Activated Nanoparticles Binding to Target Cell-Surface Receptors by All-Atom Molecular Dynamics 242
Molecular Dynamics for the Optimal Design of Functionalized Nanodevices to Target Folate Receptors on Tumor Cells 240
Predicting the accuracy of protein-ligand docking on homology models 239
Self-organizing maps of unbiased ligand-target binding pathways and kinetics 237
New Aryl Hydrocarbon Receptor Homology Model Targeted To Improve Docking Reliability 237
Evidence that ligand binding is a key determinant of Ah receptor-mediated transcriptional activity 236
Specific Ligand Binding Domain Residues Confer Low Dioxin Responsiveness to AHR1β of Xenopus laevis 236
On the role of the molecular electrostatic potential in modelling the activity of non peptide angiotensin II receptor antagonists 233
Metadynamics-Based Approaches for Modeling the Hypoxia-Inducible Factor 2α Ligand Binding Process 233
A new methodology for the comparison of protein dynamics based on self-organizing maps 232
The combustion of municipal solid wastes: PCDD and PCDF in MSW in emissions. A chemometric approach. 232
Detection of the TCDD binding-fingerprint within the Ah receptor ligand binding domain by structurally driven mutagenesis and functional analysis 231
Functional interpretation of protein conformational ensembles using self-organizing maps and network components 231
Computational prediction and in vitro validation of VEGFR1 as a novel protein target for 2,3,7,8-tetrachlorodibenzo-p-dioxin 231
Unraveling PPI hot spots for PAS domains dimerization: the case of Aryl hydrocarbon Receptor 229
MinSet: a general approach to derive maximally representative database subsets by using fragment dictionaries and its application to the SCOP database 225
A comparative analysis of molecular electrostatic potentials of chlorinated dibenzo p dioxins in relation to their biological activity 225
Molecular electrostatic potentials of substituted aromatic compounds: factors affecting the differences between ab initio and semiempirical results 224
Binding specificity of diverse AhR ligands interpreted by Molecular Modeling 224
Molecular Dynamics for the Optimal Design of Functionalized Nanodevices to Target Folate Receptors on Tumor Cells 223
Reconstruction of ARNT PAS-B Unfolding Pathways by Steered Molecular Dynamics and Artificial Neural Networks 221
Extension of a PMO model to study the regioselectivity in 1,3 dipolar cycloadditions: reactions of 3,5 dichloro 2,4,6 trimethyl benzonitrile oxide with heteroaromatic systems 218
Transitional States in Ligand-Dependent Transformation of the Aryl Hydrocarbon Receptor into Its DNA-Binding Form 216
Comparison of protein flexibilities: a study case on wild type and mutants of the SH3 domain 213
Defining the limits of homology modeling in information-driven protein docking 212
The AhR Signaling Mechanism: A Structural Point of View 209
Estimation of the toxicity equivalents of PCDD/PCDF mixtures when specific congener information is lacking: a preliminary study 205
BioPySDS: an Object-Oriented Interface to Manage Protein Dynamics in an Evolutionary Framework 205
An Aryl Hydrocarbon Receptor Sequence from the Caecilian Gymnopis multiplicata Exhibits Low Responsiveness to 2,3,7,8-tetrachlorodibenzo-p-dioxin 204
Modeling of Ligand Binding to the HIF-2α Protein with Enhanced Sampling Methods 203
The cellular and molecular determinants of naphthoquinone-dependent activation of the aryl hydrocarbon receptor 199
Structural and Functional Characterization of PAS Domain Dimers: the Aryl Hydrocarbon Receptor Paradigm 198
Drug Design in the Exascale Era: A Perspective from Massively Parallel QM/MM Simulations 193
Modelling ligands/Aryl hydrocarbon Receptor binding interactions 193
Testing structure-binding predictions from comparative modeling of the AHR ligand-binding domain: Studies with zebrafish AHR1a 190
Unraveling Dimerization Interfaces of PAS Domain Dimers: Lessons from the AhR/ARNT Complex. 188
An aryl hydrocarbon receptor from the caecilian Gymnopis multiplicata suggests low dioxin affinity in the ancestor of all three amphibian orders 188
Structural characterization of insect trehalase and assessment of potential inhibitors 187
Intermolecular interactions that determine the regioselectivity in 1,3‐dipolar cycloadditions of N‐methyl‐1,3‐oxazolium‐5‐olates with N‐(phenylmethylene)benzenesulphonamide 185
TCDD-Induced Allosteric Perturbation of the AhR:ARNT Binding to DNA 184
Conformational selection and induced fit roles in ensemble docking applications 181
Deciphering the ahr:arnt dimerization process: how to assembly the functional puzzle of interacting interfaces 179
Selezione di riferimenti bibliografici relativi alla formazione di PCDD e PCDF 177
La combustione dei rifiuti solidi urbani e le emissioni di PCDD e PCDF 176
Aryl Hydrocarbon Receptor-Dependent and-Independent Pathways Mediate Curcumin Anti-Aging Effects 168
Unveiling the inhibition mechanism of HIF-2α:ARNT dimerization by protein dynamics investigation 165
Modelling the intertwined network of ppis along the ahr:arnt dimer 162
SOMMD: an R package for the analysis of molecular dynamics simulations using self-organizing map 147
Specific amino acid residues within the ligand binding domain confer low responsiveness to 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) to an aryl hydrocarbon receptor (AHR) from the frog Xenopus Laevis 142
Integrative In Silico Strategies for the Discovery of Novel Aryl Hydrocarbon Receptor (AhR) Modulators 18
Unveiling the Dynamic Phylogeny of the Estrogen Receptor Family: A Comparative Molecular Dynamics Study for Structure-Based Drug Design 10
Totale 24.187
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Categoria #
all - tutte 76.488
article - articoli 0
book - libri 0
conference - conferenze 0
curatela - curatele 0
other - altro 0
patent - brevetti 0
selected - selezionate 0
volume - volumi 0
Totale 76.488
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Totale Lug Ago Sett Ott Nov Dic Gen Feb Mar Apr Mag Giu
2021/2022900 0 0 149 82 34 88 65 27 58 89 111 197
2022/20232.285 208 624 242 215 179 347 29 138 164 15 59 65
2023/20241.556 74 75 74 98 179 362 294 68 97 25 39 171
2024/20253.283 196 356 179 196 256 203 157 214 257 444 271 554
2025/20268.590 743 447 565 939 1.135 387 1.199 368 793 672 668 674
2026/2027492 126 336 30 0 0 0 0 0 0 0 0 0
Totale 24.187