Bicocca Open Archive

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BONATI, LAURA
 Distribuzione geografica
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Continente #
NA - Nord America 8.909
AS - Asia 4.573
EU - Europa 4.534
SA - Sud America 637
AF - Africa 82
OC - Oceania 9
Continente sconosciuto - Info sul continente non disponibili 6
Totale 18.750
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Nazione #
US - Stati Uniti d'America 8.663
SG - Singapore 1.716
CN - Cina 1.222
IT - Italia 960
DE - Germania 889
HK - Hong Kong 683
RU - Federazione Russa 659
BR - Brasile 522
SE - Svezia 515
IE - Irlanda 381
VN - Vietnam 373
UA - Ucraina 336
GB - Regno Unito 220
CA - Canada 191
IN - India 138
FR - Francia 128
FI - Finlandia 125
ID - Indonesia 100
KR - Corea 83
PL - Polonia 65
AR - Argentina 56
TR - Turchia 52
ZA - Sudafrica 43
NL - Olanda 42
JP - Giappone 41
MX - Messico 39
AT - Austria 36
ES - Italia 36
DK - Danimarca 35
BD - Bangladesh 31
BE - Belgio 28
IQ - Iraq 22
EC - Ecuador 17
PK - Pakistan 16
CH - Svizzera 15
IR - Iran 13
VE - Venezuela 12
IL - Israele 11
PT - Portogallo 10
CL - Cile 9
CO - Colombia 9
HU - Ungheria 9
MA - Marocco 9
AE - Emirati Arabi Uniti 8
CZ - Repubblica Ceca 8
SA - Arabia Saudita 8
TN - Tunisia 8
UZ - Uzbekistan 8
LK - Sri Lanka 7
MY - Malesia 7
AU - Australia 6
PH - Filippine 6
PY - Paraguay 6
RO - Romania 6
BG - Bulgaria 5
EG - Egitto 5
EU - Europa 5
CR - Costa Rica 4
LT - Lituania 4
NO - Norvegia 4
AZ - Azerbaigian 3
ET - Etiopia 3
HR - Croazia 3
JM - Giamaica 3
KE - Kenya 3
NP - Nepal 3
NZ - Nuova Zelanda 3
PE - Perù 3
SK - Slovacchia (Repubblica Slovacca) 3
TW - Taiwan 3
AM - Armenia 2
BH - Bahrain 2
DO - Repubblica Dominicana 2
DZ - Algeria 2
GR - Grecia 2
GT - Guatemala 2
HN - Honduras 2
KZ - Kazakistan 2
LU - Lussemburgo 2
MN - Mongolia 2
NG - Nigeria 2
PS - Palestinian Territory 2
SC - Seychelles 2
SI - Slovenia 2
TH - Thailandia 2
UY - Uruguay 2
A2 - ???statistics.table.value.countryCode.A2??? 1
AL - Albania 1
AO - Angola 1
BB - Barbados 1
BO - Bolivia 1
BY - Bielorussia 1
CG - Congo 1
CY - Cipro 1
GH - Ghana 1
IS - Islanda 1
JO - Giordania 1
KG - Kirghizistan 1
KW - Kuwait 1
LV - Lettonia 1
Totale 18.741
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Città #
Ann Arbor 1.537
Singapore 1.006
Hong Kong 677
Ashburn 659
Woodbridge 638
Chandler 606
Fairfield 594
Frankfurt am Main 496
Houston 466
Dublin 365
Wilmington 365
Milan 364
Jacksonville 353
Dearborn 243
Beijing 231
Seattle 230
Santa Clara 223
New York 219
Cambridge 206
Princeton 164
Shanghai 164
Los Angeles 134
Hefei 125
Dallas 118
Nanjing 116
Jakarta 83
Ho Chi Minh City 81
Dong Ket 78
Moscow 76
Seoul 63
Buffalo 62
Hanoi 59
Lachine 59
Munich 58
Altamura 54
São Paulo 53
Lawrence 52
The Dalles 52
Chicago 48
Helsinki 47
San Diego 42
Ottawa 41
Council Bluffs 39
Andover 31
Boardman 30
Toronto 29
Tianjin 28
Warsaw 28
Denver 27
Kraków 27
Shenyang 27
Brussels 26
Guangzhou 26
Vienna 26
Tokyo 25
Brooklyn 24
Edmonton 24
Nanchang 24
Falls Church 23
Fremont 23
Johannesburg 23
Pune 23
Changsha 21
Hebei 21
Rio de Janeiro 21
Stockholm 21
Jinan 19
Gavirate 18
London 18
Orem 18
Atlanta 17
Jiaxing 17
Mountain View 17
Phoenix 17
Montreal 16
Poplar 16
Rome 16
Huizen 15
Grafing 14
Nürnberg 14
Ankara 13
Bologna 13
Kunming 13
Norwalk 13
Nuremberg 13
Barcelona 12
Bari 12
Chennai 12
Manchester 12
Pioltello 12
Zhengzhou 12
Amsterdam 11
Biên Hòa 11
Catania 11
Da Nang 11
Mexico City 11
Parabiago 11
Salt Lake City 11
Ancona 10
Brasília 10
Totale 12.390
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Nome #
Molecular modeling of the AhR structure and interactions can shed light on ligand-dependent activation and transformation mechanisms 505
Modeling the binding of diverse ligands within the Ah receptor ligand binding domain 422
Exploring the PXR ligand binding mechanism with advanced Molecular Dynamics methods 418
Functional annotation of the mesophilic-like character of mutants in a cold-adapted enzyme by self-organising map analysis of their molecular dynamics 403
Ligand-induced perturbation of the HIF-2α:ARNT dimer dynamics 396
Modeling Binding with Large Conformational Changes: Key Points in Ensemble-Docking Approaches 349
Role of dynamics in ligand-protein interactions: modelling of binding to the pregnane x receptor 322
Docking to homology models highlights the molecular determinants of ligand binding to the AhR 312
No dance, no partner! A tale of receptor flexibility in docking and virtual screening 279
NURA: A curated dataset of nuclear receptor modulators 273
A selected bibliography on PCDD and PCDF formation 269
Complementarietà di metodi di modellistica molecolare e di bioinformatica strutturale nello studio di struttura e funzione di proteine 258
Mechanism of RGD-conjugated nanodevice binding to its target protein integrin αVβ3 by atomistic molecular dynamics and machine learning 256
Design of gliadin peptide analogues with low affinity for the celiac disease associated HLA–DQ2 protein 249
Ginsenosides are novel naturally-occurring aryl hydrocarbon receptor ligands 248
Self organizing maps to efficiently cluster and functionally interpret protein conformational ensembles 247
Computational approaches to shed light on molecular mechanisms in biological processes 234
Chemometric approaches in environmental problems concerning PCDD and PCDF. Data interpretation and source correlation. Mechanisms of formation and destruction in MSW combustion process. 229
AHR Ligands: Promiscuity in Binding and Diversity in Response 227
Detecting similarities among distant homologous proteins by comparison of domain flexibilities 224
Ligand binding and activation of the Ah receptor 224
The combustion of Municipal Solid Wastes and PCDD and PCDF emissions. Part. 1 PCDD and PCDF in MSW 224
In vitro toxicity and in silico docking analysis of two novel selective AH-receptor modulators 224
Structural modeling of the AhR:ARNT complex in the bHLH–PASA–PASB region elucidates the key determinants of dimerization 223
Artificial Neural Networks for Efficient Clustering of Conformational Ensembles and their Potential for Medicinal Chemistry 222
Comparative in vitro and in silico analysis of the selectivity of indirubin as a human ah receptor agonist 222
Conformational and functional analysis of molecular dynamics trajectories by Self-Organising Maps 220
Metadynamics simulations for the investigation of drug loading on functionalized inorganic nanoparticles 217
An aryl hydrocarbon receptor from the salamander ambystoma mexicanum exhibits low sensitivity to 2,3,7,8-tetrachlorodibenzo -p -dioxin 214
ZADDOCK: incorporating ab initio search into HADDOCK 212
The combustion of Municipal Solid Wastes and PCDD and PCDF emissions. Part. 2 PCDD and PCDF in Stack Gases 211
Deciphering Dimerization Modes of PAS Domains: Computational and Experimental Analyses of the AhR:ARNT Complex Reveal New Insights Into the Mechanisms of AhR Transformation 210
Toward a mechanistic understanding of PCDD biological activity based on molecular electrostatic potential modeling 207
The toxicity equivalency factor scheme applied to municipal incinerator PCDD/PCDF emissions when specific congener information is lacking 205
Identification of potential aryl hydrocarbon receptor ligands by virtual screening of industrial chemicals 205
Structural and Functional Characterization of the Aryl Hydrocarbon Receptor Ligand Binding Domain by Homology Modeling and Mutational Analysis 203
Specific Ligand Binding Domain Residues Confer Low Dioxin Responsiveness to AHR1β of Xenopus laevis 203
Predicting the accuracy of protein-ligand docking on homology models 203
New Aryl Hydrocarbon Receptor Homology Model Targeted To Improve Docking Reliability 203
Comparative Analysis of Homology Models of the Ah Receptor Ligand Binding Domain: Verification of Structure-Function Predictions by Site-Directed Mutagenesis of a Nonfunctional Receptor 203
Ligand docking in AhR homology model: specificity of structurally diverse ligands interactions 202
Mechanism of a nanodevice binding to its target protein by atomistic molecular dynamics: the case of RGD-conjugated PEGylated TiO2 nanoparticles binding to integrins αVβ3 201
On the choice of the perturbed state for PMO prediction of selectivities in cycloaddition reactions 201
Functional annotation of protein conformations by Self-Organizing Maps 200
Evidence that ligand binding is a key determinant of Ah receptor-mediated transcriptional activity 198
The combustion of municipal solid wastes: PCDD and PCDF in MSW in emissions. A chemometric approach. 198
Conservation and specialization in PAS domain dynamics 195
On the role of the molecular electrostatic potential in modelling the activity of non peptide angiotensin II receptor antagonists 195
Predicting the accuracy of protein-ligand docking on homology models 193
A new methodology for the comparison of protein dynamics based on self-organizing maps 191
Computational prediction and in vitro validation of VEGFR1 as a novel protein target for 2,3,7,8-tetrachlorodibenzo-p-dioxin 191
Extension of a PMO model to study the regioselectivity in 1,3 dipolar cycloadditions: reactions of 3,5 dichloro 2,4,6 trimethyl benzonitrile oxide with heteroaromatic systems 188
Unraveling PPI hot spots for PAS domains dimerization: the case of Aryl hydrocarbon Receptor 188
A Neural Network Approach for the Identification of Pathways in Molecular Dynamics Simulations of Ligand Binding 188
Study of ligand binding to HIF-2α through Path-Metadynamics 188
MinSet: a general approach to derive maximally representative database subsets by using fragment dictionaries and its application to the SCOP database 187
Detection of the TCDD binding-fingerprint within the Ah receptor ligand binding domain by structurally driven mutagenesis and functional analysis 187
Metadynamics-Based Approaches for Modeling the Hypoxia-Inducible Factor 2α Ligand Binding Process 187
Molecular electrostatic potentials of substituted aromatic compounds: factors affecting the differences between ab initio and semiempirical results 184
A comparative analysis of molecular electrostatic potentials of chlorinated dibenzo p dioxins in relation to their biological activity 183
Reconstruction of ARNT PAS-B Unfolding Pathways by Steered Molecular Dynamics and Artificial Neural Networks 183
Binding specificity of diverse AhR ligands interpreted by Molecular Modeling 180
Functional interpretation of protein conformational ensembles using self-organizing maps and network components 178
Transitional States in Ligand-Dependent Transformation of the Aryl Hydrocarbon Receptor into Its DNA-Binding Form 173
Molecular Dynamics for the Optimal Design of Functionalized Nanodevices to Target Folate Receptors on Tumor Cells 172
Comparison of protein flexibilities: a study case on wild type and mutants of the SH3 domain 172
Self-organizing maps of unbiased ligand-target binding pathways and kinetics 169
Structural and Functional Characterization of PAS Domain Dimers: the Aryl Hydrocarbon Receptor Paradigm 166
Estimation of the toxicity equivalents of PCDD/PCDF mixtures when specific congener information is lacking: a preliminary study 165
An Aryl Hydrocarbon Receptor Sequence from the Caecilian Gymnopis multiplicata Exhibits Low Responsiveness to 2,3,7,8-tetrachlorodibenzo-p-dioxin 164
Defining the limits of homology modeling in information-driven protein docking 164
BioPySDS: an Object-Oriented Interface to Manage Protein Dynamics in an Evolutionary Framework 163
Molecular Dynamics for the Optimal Design of Functionalized Nanodevices to Target Folate Receptors on Tumor Cells 154
Unraveling Dimerization Interfaces of PAS Domain Dimers: Lessons from the AhR/ARNT Complex. 152
Testing structure-binding predictions from comparative modeling of the AHR ligand-binding domain: Studies with zebrafish AHR1a 149
Structural characterization of insect trehalase and assessment of potential inhibitors 149
Deciphering the ahr:arnt dimerization process: how to assembly the functional puzzle of interacting interfaces 149
Modeling of Ligand Binding to the HIF-2α Protein with Enhanced Sampling Methods 147
Conformational selection and induced fit roles in ensemble docking applications 145
The cellular and molecular determinants of naphthoquinone-dependent activation of the aryl hydrocarbon receptor 145
Mechanism of Ligand-Activated Nanoparticles Binding to Target Cell-Surface Receptors by All-Atom Molecular Dynamics 144
PathDetect-SOM: A Neural Network Approach for the Identification of Pathways in Ligand Binding Simulations 144
Intermolecular interactions that determine the regioselectivity in 1,3‐dipolar cycloadditions of N‐methyl‐1,3‐oxazolium‐5‐olates with N‐(phenylmethylene)benzenesulphonamide 142
Selezione di riferimenti bibliografici relativi alla formazione di PCDD e PCDF 136
An aryl hydrocarbon receptor from the caecilian Gymnopis multiplicata suggests low dioxin affinity in the ancestor of all three amphibian orders 135
Modelling ligands/Aryl hydrocarbon Receptor binding interactions 134
Drug Design in the Exascale Era: A Perspective from Massively Parallel QM/MM Simulations 127
Modelling the intertwined network of ppis along the ahr:arnt dimer 126
Aryl Hydrocarbon Receptor-Dependent and-Independent Pathways Mediate Curcumin Anti-Aging Effects 122
La combustione dei rifiuti solidi urbani e le emissioni di PCDD e PCDF 122
The AhR Signaling Mechanism: A Structural Point of View 122
TCDD-Induced Allosteric Perturbation of the AhR:ARNT Binding to DNA 115
Unveiling the inhibition mechanism of HIF-2α:ARNT dimerization by protein dynamics investigation 115
Specific amino acid residues within the ligand binding domain confer low responsiveness to 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) to an aryl hydrocarbon receptor (AHR) from the frog Xenopus Laevis 113
Totale 19.256
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Categoria #
all - tutte 62.552
article - articoli 0
book - libri 0
conference - conferenze 0
curatela - curatele 0
other - altro 0
patent - brevetti 0
selected - selezionate 0
volume - volumi 0
Totale 62.552
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Totale Lug Ago Sett Ott Nov Dic Gen Feb Mar Apr Mag Giu
2020/20211.029 0 0 0 0 0 106 142 135 145 175 100 226
2021/20221.127 80 147 149 82 34 88 65 27 58 89 111 197
2022/20232.285 208 624 242 215 179 347 29 138 164 15 59 65
2023/20241.556 74 75 74 98 179 362 294 68 97 25 39 171
2024/20253.283 196 356 179 196 256 203 157 214 257 444 271 554
2025/20264.151 743 447 565 939 1.135 322 0 0 0 0 0 0
Totale 19.256