Bicocca Open Archive

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BONATI, LAURA
 Distribuzione geografica
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Continente #
NA - Nord America 6.880
EU - Europa 3.188
AS - Asia 1.025
SA - Sud America 18
AF - Africa 9
Continente sconosciuto - Info sul continente non disponibili 6
OC - Oceania 5
Totale 11.131
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Nazione #
US - Stati Uniti d'America 6.730
DE - Germania 783
IT - Italia 664
CN - Cina 533
SE - Svezia 480
IE - Irlanda 381
UA - Ucraina 314
HK - Hong Kong 163
GB - Regno Unito 160
CA - Canada 149
VN - Vietnam 127
IN - India 97
FI - Finlandia 96
FR - Francia 94
RU - Federazione Russa 42
DK - Danimarca 32
TR - Turchia 32
PL - Polonia 27
BE - Belgio 25
AT - Austria 22
NL - Olanda 20
KR - Corea 13
SG - Singapore 13
ES - Italia 12
IR - Iran 12
BR - Brasile 11
CH - Svizzera 10
JP - Giappone 9
LK - Sri Lanka 7
CL - Cile 6
PT - Portogallo 6
EU - Europa 5
PK - Pakistan 5
AU - Australia 4
NO - Norvegia 4
HU - Ungheria 3
MY - Malesia 3
RO - Romania 3
ZA - Sudafrica 3
BG - Bulgaria 2
CZ - Repubblica Ceca 2
ID - Indonesia 2
IL - Israele 2
SC - Seychelles 2
SI - Slovenia 2
TN - Tunisia 2
A2 - ???statistics.table.value.countryCode.A2??? 1
AM - Armenia 1
AR - Argentina 1
BD - Bangladesh 1
EG - Egitto 1
GR - Grecia 1
HR - Croazia 1
IQ - Iraq 1
KW - Kuwait 1
MN - Mongolia 1
MU - Mauritius 1
MX - Messico 1
NZ - Nuova Zelanda 1
PH - Filippine 1
RS - Serbia 1
SK - Slovacchia (Repubblica Slovacca) 1
TJ - Tagikistan 1
Totale 11.131
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Città #
Ann Arbor 1.537
Woodbridge 638
Chandler 606
Fairfield 594
Frankfurt am Main 489
Houston 455
Dublin 365
Wilmington 358
Jacksonville 353
Ashburn 348
Dearborn 243
Milan 241
Seattle 225
Cambridge 206
New York 167
Princeton 164
Hong Kong 160
Shanghai 120
Nanjing 116
Dong Ket 78
Lachine 59
Beijing 55
Altamura 54
Lawrence 52
San Diego 41
Ottawa 38
Helsinki 34
Andover 31
Boardman 30
Kraków 27
Brussels 24
Nanchang 24
Shenyang 24
Falls Church 23
Fremont 23
Edmonton 22
Tianjin 22
Hebei 21
Pune 21
Vienna 21
Guangzhou 20
Toronto 19
Gavirate 18
Jinan 17
Mountain View 17
Changsha 16
Jiaxing 16
Huizen 15
Grafing 14
Nürnberg 14
London 13
Norwalk 13
Pioltello 12
Parabiago 11
Rome 11
Washington 10
Bologna 9
Kunming 8
Los Angeles 8
Montréal 8
Zhengzhou 8
Auburn Hills 7
Barcelona 7
Catania 7
Colombo 7
Maccagno 7
Perugia 7
Ancona 6
Gangnam-gu 6
Langenfeld 6
Lissone 6
Portsmouth 6
Redmond 6
University Park 6
Uppsala 6
Amadora 5
Casavatore 5
Fuzhou 5
Kiev 5
Ningbo 5
Sacramento 5
Bergamo 4
Berkeley 4
Edinburgh 4
Hangzhou 4
Miami 4
New Delhi 4
Pittsburgh 4
Porto Torres 4
Tappahannock 4
Valdivia 4
Verona 4
Ahwaz 3
Austin 3
Berlin 3
Biella 3
Busto Arsizio 3
Cagliari 3
Cardano al Campo 3
Changchun 3
Totale 8.574
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Nome #
Molecular modeling of the AhR structure and interactions can shed light on ligand-dependent activation and transformation mechanisms 411
Modeling the binding of diverse ligands within the Ah receptor ligand binding domain 337
Exploring the PXR ligand binding mechanism with advanced Molecular Dynamics methods 335
Functional annotation of the mesophilic-like character of mutants in a cold-adapted enzyme by self-organising map analysis of their molecular dynamics 325
Ligand-induced perturbation of the HIF-2α:ARNT dimer dynamics 322
Modeling Binding with Large Conformational Changes: Key Points in Ensemble-Docking Approaches 287
Role of dynamics in ligand-protein interactions: modelling of binding to the pregnane x receptor 241
Docking to homology models highlights the molecular determinants of ligand binding to the AhR 229
A selected bibliography on PCDD and PCDF formation 205
Computational approaches to shed light on molecular mechanisms in biological processes 176
Complementarietà di metodi di modellistica molecolare e di bioinformatica strutturale nello studio di struttura e funzione di proteine 170
Self organizing maps to efficiently cluster and functionally interpret protein conformational ensembles 170
Chemometric approaches in environmental problems concerning PCDD and PCDF. Data interpretation and source correlation. Mechanisms of formation and destruction in MSW combustion process. 168
Ginsenosides are novel naturally-occurring aryl hydrocarbon receptor ligands 168
Design of gliadin peptide analogues with low affinity for the celiac disease associated HLA–DQ2 protein 165
The combustion of Municipal Solid Wastes and PCDD and PCDF emissions. Part. 1 PCDD and PCDF in MSW 164
Comparative in vitro and in silico analysis of the selectivity of indirubin as a human ah receptor agonist 163
In vitro toxicity and in silico docking analysis of two novel selective AH-receptor modulators 161
Ligand binding and activation of the Ah receptor 160
Structural modeling of the AhR:ARNT complex in the bHLH–PASA–PASB region elucidates the key determinants of dimerization 159
The combustion of Municipal Solid Wastes and PCDD and PCDF emissions. Part. 2 PCDD and PCDF in Stack Gases 155
The combustion of municipal solid wastes: PCDD and PCDF in MSW in emissions. A chemometric approach. 154
Detecting similarities among distant homologous proteins by comparison of domain flexibilities 153
Artificial Neural Networks for Efficient Clustering of Conformational Ensembles and their Potential for Medicinal Chemistry 151
AHR Ligands: Promiscuity in Binding and Diversity in Response 150
Toward a mechanistic understanding of PCDD biological activity based on molecular electrostatic potential modeling 148
Conformational and functional analysis of molecular dynamics trajectories by Self-Organising Maps 146
On the choice of the perturbed state for PMO prediction of selectivities in cycloaddition reactions 145
An aryl hydrocarbon receptor from the salamander ambystoma mexicanum exhibits low sensitivity to 2,3,7,8-tetrachlorodibenzo -p -dioxin 145
Evidence that ligand binding is a key determinant of Ah receptor-mediated transcriptional activity 140
New Aryl Hydrocarbon Receptor Homology Model Targeted To Improve Docking Reliability 140
The toxicity equivalency factor scheme applied to municipal incinerator PCDD/PCDF emissions when specific congener information is lacking 140
NURA: A curated dataset of nuclear receptor modulators 140
Conservation and specialization in PAS domain dynamics 137
Deciphering Dimerization Modes of PAS Domains: Computational and Experimental Analyses of the AhR:ARNT Complex Reveal New Insights Into the Mechanisms of AhR Transformation 137
MinSet: a general approach to derive maximally representative database subsets by using fragment dictionaries and its application to the SCOP database 136
Structural and Functional Characterization of the Aryl Hydrocarbon Receptor Ligand Binding Domain by Homology Modeling and Mutational Analysis 135
Identification of potential aryl hydrocarbon receptor ligands by virtual screening of industrial chemicals 134
Specific Ligand Binding Domain Residues Confer Low Dioxin Responsiveness to AHR1β of Xenopus laevis 132
Molecular electrostatic potentials of substituted aromatic compounds: factors affecting the differences between ab initio and semiempirical results 132
Predicting the accuracy of protein-ligand docking on homology models 130
Ligand docking in AhR homology model: specificity of structurally diverse ligands interactions 130
A new methodology for the comparison of protein dynamics based on self-organizing maps 128
Detection of the TCDD binding-fingerprint within the Ah receptor ligand binding domain by structurally driven mutagenesis and functional analysis 127
Computational prediction and in vitro validation of VEGFR1 as a novel protein target for 2,3,7,8-tetrachlorodibenzo-p-dioxin 127
A comparative analysis of molecular electrostatic potentials of chlorinated dibenzo p dioxins in relation to their biological activity 126
Comparative Analysis of Homology Models of the Ah Receptor Ligand Binding Domain: Verification of Structure-Function Predictions by Site-Directed Mutagenesis of a Nonfunctional Receptor 125
On the role of the molecular electrostatic potential in modelling the activity of non peptide angiotensin II receptor antagonists 125
Unraveling PPI hot spots for PAS domains dimerization: the case of Aryl hydrocarbon Receptor 124
No dance, no partner! A tale of receptor flexibility in docking and virtual screening 123
Predicting the accuracy of protein-ligand docking on homology models 120
Extension of a PMO model to study the regioselectivity in 1,3 dipolar cycloadditions: reactions of 3,5 dichloro 2,4,6 trimethyl benzonitrile oxide with heteroaromatic systems 119
ZADDOCK: incorporating ab initio search into HADDOCK 117
Binding specificity of diverse AhR ligands interpreted by Molecular Modeling 116
Estimation of the toxicity equivalents of PCDD/PCDF mixtures when specific congener information is lacking: a preliminary study 114
Defining the limits of homology modeling in information-driven protein docking 114
Comparison of protein flexibilities: a study case on wild type and mutants of the SH3 domain 111
Transitional States in Ligand-Dependent Transformation of the Aryl Hydrocarbon Receptor into Its DNA-Binding Form 102
Structural and Functional Characterization of PAS Domain Dimers: the Aryl Hydrocarbon Receptor Paradigm 101
BioPySDS: an Object-Oriented Interface to Manage Protein Dynamics in an Evolutionary Framework 100
Conformational selection and induced fit roles in ensemble docking applications 98
Functional interpretation of protein conformational ensembles using self-organizing maps and network components 94
Selezione di riferimenti bibliografici relativi alla formazione di PCDD e PCDF 91
Functional annotation of protein conformations by Self-Organizing Maps 91
Metadynamics-Based Approaches for Modeling the Hypoxia-Inducible Factor 2α Ligand Binding Process 90
Unraveling Dimerization Interfaces of PAS Domain Dimers: Lessons from the AhR/ARNT Complex. 88
An Aryl Hydrocarbon Receptor Sequence from the Caecilian Gymnopis multiplicata Exhibits Low Responsiveness to 2,3,7,8-tetrachlorodibenzo-p-dioxin 88
Deciphering the ahr:arnt dimerization process: how to assembly the functional puzzle of interacting interfaces 87
Structural characterization of insect trehalase and assessment of potential inhibitors 86
Testing structure-binding predictions from comparative modeling of the AHR ligand-binding domain: Studies with zebrafish AHR1a 85
Intermolecular interactions that determine the regioselectivity in 1,3‐dipolar cycloadditions of N‐methyl‐1,3‐oxazolium‐5‐olates with N‐(phenylmethylene)benzenesulphonamide 83
A Neural Network Approach for the Identification of Pathways in Molecular Dynamics Simulations of Ligand Binding 81
La combustione dei rifiuti solidi urbani e le emissioni di PCDD e PCDF 80
Modelling the intertwined network of ppis along the ahr:arnt dimer 79
Unveiling the inhibition mechanism of HIF-2α:ARNT dimerization by protein dynamics investigation 75
Specific amino acid residues within the ligand binding domain confer low responsiveness to 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) to an aryl hydrocarbon receptor (AHR) from the frog Xenopus Laevis 72
Modelling ligands/Aryl hydrocarbon Receptor binding interactions 71
Reconstruction of ARNT PAS-B Unfolding Pathways by Steered Molecular Dynamics and Artificial Neural Networks 71
Study of ligand binding to HIF-2α through Path-Metadynamics 68
Modeling of Ligand Binding to the HIF-2α Protein with Enhanced Sampling Methods 55
An aryl hydrocarbon receptor from the caecilian Gymnopis multiplicata suggests low dioxin affinity in the ancestor of all three amphibian orders 46
The cellular and molecular determinants of naphthoquinone-dependent activation of the aryl hydrocarbon receptor 45
Metadynamics simulations for the investigation of drug loading on functionalized inorganic nanoparticles 37
PathDetect-SOM: A Neural Network Approach for the Identification of Pathways in Ligand Binding Simulations 25
Molecular Dynamics for the Optimal Design of Functionalized Nanodevices to Target Folate Receptors on Tumor Cells 20
Drug Design in the Exascale Era: A Perspective from Massively Parallel QM/MM Simulations 17
Aryl Hydrocarbon Receptor-Dependent and-Independent Pathways Mediate Curcumin Anti-Aging Effects 16
Mechanism of RGD-conjugated nanodevice binding to its target protein integrin αVβ3 by atomistic molecular dynamics and machine learning 15
TCDD-Induced Allosteric Perturbation of the AhR:ARNT Binding to DNA 10
Totale 11.609
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Categoria #
all - tutte 31.039
article - articoli 0
book - libri 0
conference - conferenze 0
curatela - curatele 0
other - altro 0
patent - brevetti 0
selected - selezionate 0
volume - volumi 0
Totale 31.039
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Totale Lug Ago Sett Ott Nov Dic Gen Feb Mar Apr Mag Giu
2018/2019561 0 0 0 0 0 0 0 0 0 119 205 237
2019/20202.145 255 101 158 166 202 249 320 139 193 180 133 49
2020/20211.655 100 78 159 174 115 106 142 135 145 175 100 226
2021/20221.127 80 147 149 82 34 88 65 27 58 89 111 197
2022/20232.285 208 624 242 215 179 347 29 138 164 15 59 65
2023/20241.343 74 75 74 98 179 362 294 68 97 22 0 0
Totale 11.609