BERETTA, STEFANO
BERETTA, STEFANO
DIPARTIMENTO DI INFORMATICA, SISTEMISTICA E COMUNICAZIONE
Reconstructing isoform graphs from RNA-Seq data
2012 Beretta, S; Bonizzoni, P; Rizzi, R; DELLA VEDOVA, G
Algorithms for next generation sequencing data analysis
2013 Beretta, S
A hybrid genetic algorithm for the repetition free longest common subsequence problem
2013 Castelli, M; Beretta, S; Vanneschi, L
Covering Pairs in Directed Acyclic Graphs
2014 Beerenwinkel, N; Beretta, S; Bonizzoni, P; Dondi, R; Pirola, Y
Modeling Alternative Splicing Variants from RNA-Seq Data with Isoform Graphs
2014 Beretta, S; Bonizzoni, P; DELLA VEDOVA, G; Pirola, Y; Rizzi, R
Gene tree correction by leaf removal and modification: Tractability and approximability
2014 Beretta, S; Dondi, R
Further Steps in TANGO: Improved Taxonomic Assignment in Metagenomics
2014 Alonso Alemany, D; Barré, A; Beretta, S; Bonizzoni, P; Nikolski, M; Valiente, G
Correcting gene tree by removal and modification: Tractability and approximability
2015 Beretta, S; Castelli, M; Dondi, R
8th workshop on biomedical and bioinformatics challenges for computer science - BBC2015
2015 Beretta, S; Cannataro, M; Dondi, R
Covering Pairs in Directed Acyclic Graphs
2015 Beerenwinkel, N; Beretta, S; Bonizzoni, P; Dondi, R; Pirola, Y
Erratum: Corrigendum to “Parameterized tractability of the maximum-duo preservation string mapping problem” (Theoretical Computer Science (2016) 646 (16–25) (S0304397516303255) (10.1016/j.tcs.2016.07.011))
2016 Beretta, S; Castelli, M; Dondi, R
9th workshop on biomedical and bioinformatics challenges for computer science - BBC2016
2016 Beretta, S; Cannataro, M; Castelli, M
New Graph-Based Algorithm for Comprehensive Identification and Tracking Retroviral Integration Sites
2016 Calabria, A; Beretta, S; Merelli, I; Spinozzi, G; Brasca, S; Benedicenti, F; Tenderini, E; Biffi, A; Montini, E
Correcting Gene Trees by Leaf Insertions: Complexity and Approximation
2016 Beretta, S; Dondi, R
SPIRE, a modular pipeline for eQTL analysis of RNA-Seq data, reveals a regulatory hotspot controlling miRNA expression in: C. elegans
2016 Kel, I; Chang, Z; Galluccio, N; Romeo, M; Beretta, S; Diomede, L; Mezzelani, A; Milanesi, L; Dieterich, C; Merelli, I
Combining Bayesian approaches and evolutionary techniques for the inference of breast cancer networks
2016 Ramazzotti, D; Merelli, I; Gonçalves, I; Castelli, M; Beretta, S
Parameterized tractability of the maximum-duo preservation string mapping problem
2016 Beretta, S; Castelli, M; Dondi, R
A Machine Learning Approach for the Integration of miRNA-Target Predictions
2016 Beretta, S; Castelli, M; Martinez, Y; Munoz, L; Silva, S; Trujillo, L; Milanesi, L; Merelli, I
Low-Power Architectures for miRNA-Target Genome Wide Analysis
2017 Beretta, S; Morganti, L; Corni, E; Ferraro, A; Cesini, D; D'Agostino, D; Milanesi, L; Merelli, I
Mapping RNA-seq data to a transcript graph via approximate pattern matching to a hypertext
2017 Beretta, S; Bonizzoni, P; Denti, L; Previtali, M; Rizzi, R