Sfoglia per Autore
Differential analysis of alternative splicing events in gene regions using residual neural networks
2025 Ciccolella, S; Denti, L; Avila Cartes, J; Della Vedova, G; Pirola, Y; Rizzi, R; Bonizzoni, P
Cancer progression inference using a finite-state model to allow recurrences and losses of mutations
2025 Ciccolella, S; Patterson, M; Hajirasouliha, I; Della Vedova, G
Pangenome Graph Indexing via the Multidollar-BWT
2025 Cozzi, D; Riccardi, B; Denti, L; Ciccolella, S; Sadakane, K; Bonizzoni, P
Plastic: An Easy to Use and Modular Tool for Benchmarking Tumor Phylogeny Reconstruction Pipelines
2025 Juyal, A; Tayebi, Z; Zelikovsky, A; Soto Gomez, M; Ciccolella, S; Della Vedova, G; Patterson, M
Differential quantification of alternative splicing events on spliced pangenome graphs
2024 Ciccolella, S; Cozzi, D; Della Vedova, G; Kuria, S; Bonizzoni, P; Denti, L
RecGraph: recombination-aware alignment of sequences to variation graphs
2024 Avila Cartes, J; Bonizzoni, P; Ciccolella, S; Della Vedova, G; Denti, L; Didelot, X; Monti, D; Pirola, Y
PangeBlocks: customized construction of pangenome graphs via maximal blocks
2024 Avila Cartes, J; Bonizzoni, P; Ciccolella, S; Della Vedova, G; Denti, L
Accurate and fast clade assignment via deep learning and frequency chaos game representation
2023 Avila Cartes, J; Anand, S; Ciccolella, S; Bonizzoni, P; Della Vedova, G
Three Metaheuristic Approaches for Tumor Phylogeny Inference: An Experimental Comparison
2023 Ciccolella, S; Della Vedova, G; Filipović, V; Soto Gomez, M
Reads2Vec: Efficient Embedding of Raw High-Throughput Sequencing Reads Data
2023 Chourasia, P; Ali, S; Ciccolella, S; Della Vedova, G; Patterson, M
Practical algorithms for Computational Phylogenetics
2022 Ciccolella, S
Clustering SARS-CoV-2 Variants from Raw High-Throughput Sequencing Reads Data
2022 Chourasia, P; Ali, S; Ciccolella, S; Della Vedova, G; Patterson, M
MALVIRUS: an integrated application for viral variant analysis
2021 Ciccolella, S; Denti, L; Bonizzoni, P; Della Vedova, G; Pirola, Y; Previtali, M
Triplet-based similarity score for fully multi-labeled trees with poly-occurring labels
2021 Ciccolella, S; Bernardini, G; Denti, L; Bonizzoni, P; Previtali, M; Vedova, G
Inferring Cancer Progression from Single-Cell Sequencing while Allowing Mutation Losses
2021 Ciccolella, S; Ricketts, C; Soto Gomez, M; Patterson, M; Silverbush, D; Bonizzoni, P; Hajirasouliha, I; Della Vedova, G
Effective Clustering for Single Cell Sequencing Cancer Data
2021 Ciccolella, S; Patterson, M; Bonizzoni, P; Della Vedova, G
Simpler and Faster Development of Tumor Phylogeny Pipelines
2021 Ali, S; Ciccolella, S; Lucarella, L; Della Vedova, G; Patterson, M
gpps: an ILP-based approach for inferring cancer progression with mutation losses from single cell data
2020 Ciccolella, S; Soto Gomez, M; Patterson, M; Della Vedova, G; Hajirasouliha, I; Bonizzoni, P
PhISCS: a combinatorial approach for subperfect tumor phylogeny reconstruction via integrative use of single-cell and bulk sequencing data
2019 Malikic, S; Mehrabadi, F; Ciccolella, S; Rahman, M; Ricketts, C; Haghshenas, E; Seidman, D; Hach, F; Hajirasouliha, I; Sahinalp, S
Effective clustering for single cell sequencing cancer data
2019 Ciccolella, S; Patterson, M; Bonizzoni, P; Della Vedova, G
Legenda icone
- file ad accesso aperto
- file disponibili sulla rete interna
- file disponibili agli utenti autorizzati
- file disponibili solo agli amministratori
- file sotto embargo
- nessun file disponibile