PELIZZOLA, MATTIA
PELIZZOLA, MATTIA
DIPARTIMENTO DI BIOTECNOLOGIE E BIOSCIENZE
A power law global error model for the identification of differentially expressed genes in microarray data
2004 Pavelka, N; Pelizzola, M; Vizzardelli, C; Capozzoli, M; Splendiani, A; Granucci, F; Castagnoli, P
A Type I IFN-Dependent Pathway Induced by Schistosoma mansoni Eggs in Mouse Myeloid Dendritic Cells Generates an Inflammatory Signature
2004 Trottein, F; Pavelka, N; Vizzardelli, C; Angeli, V; Zouain, C; Pelizzola, M; Capozzoli, M; Urbano, M; Capron, M; Belardelli, F; Granucci, F; Ricciardi-Castagnoli, P
Transcriptional Profiling of Dendritic Cells in Response to Pathogens
2005 Foti, M; Granucci, F; Pelizzola, M; Pavelka, N; Beretta, O; Urbano, M; Zanoni, I; Capuano, G; Mingozzi, F; Castagnoli, P
A critical role for lipophosphoglycan in proinflammatory responses of dendritic cells to Leishmania mexicana
2005 Aebischer, T; Bennett, C; Pelizzola, M; Vizzardelli, C; Pavelka, N; Urbano, M; Capozzoli, M; Luchini, A; Ilg, T; Granucci, F; Blackburn, C; Castagnoli, P
Gene Profiling of Dendritic cells during Host–Pathogen Interactions
2006 Foti, M; Granucci, F; Pelizzola, M; Pavelka, N; Beretta, O; Vizzardelli, C; Urbano, M; Zanoni, I; Capuano, G; Mingozzi, F; Trottein, F; Aebisher, T; Castagnoli, P
Effects of dexamethazone on LPS-induced activation and migration of mouse dendritic cells revealed by a genome-wide transcriptional analysis
2006 Vizzardelli, C; Pavelka, N; Luchini, A; Zanoni, I; Bendickson, L; Pelizzola, M; Beretta, O; Foti, M; Granucci, F; Nilsen Hamilton, M; Castagnoli, P
AMDA: an R package for the automated microarray data analysis
2006 Pelizzola, M; Pavelka, N; Foti, M; Castagnoli, P
Dendritic cells in pathogen recognition and induction of immune responses: A functional genomics approach
2006 Foti, M; Granucci, F; Pelizzola, M; Beretta, O; Castagnoli, P
The Genopolis Microarray Database
2007 Splendiani, A; Brandizi, M; Even, G; Beretta, O; Pavelka, N; Pelizzola, M; Mayhaus, M; Foti, M; Mauri, G; Castagnoli, P
Dendritic cells inflammatory signature induced by microbial pathogens
2008 Foti, M; Beretta, O; Pelizzola, M; Castagnoli, P
MEDME: An experimental and analytical methodology for the estimation of DNA methylation levels based on microarray derived MeDIP-enrichment
2008 Pelizzola, M; Koga, Y; Urban, A; Krauthammer, M; Weissman, S; Halaban, R; Molinaro, A
Statistical similarities between transcriptomics and quantitative shotgun proteomics data
2008 Pavelka, N; Fournier, M; Swanson, S; Pelizzola, M; Ricciardi-Castagnoli, P; Florens, L; Washburn, M
Probing host pathogen cross-talk by transcriptional profiling of both Mycobacterium tuberculosis and infected human dendritic cells and macrophages
2008 Tailleux, L; Waddell, S; Pelizzola, M; Mortellaro, A; Withers, M; Tanne, A; Castagnoli, P; Gicquel, B; Stoker, N; Butcher, P; Foti, M; Neyrolles, O
Genome-wide screen of promoter methylation identifies novel markers in melanoma
2009 Koga, Y; Pelizzola, M; Cheng, E; Krauthammer, M; Sznol, M; Ariyan, S; Narayan, D; Molinaro, A; Halaban, R; Weissman, S
Integrative analysis of epigenetic modulation in melanoma cell response to decitabine: clinical implications
2009 Halaban, R; Krauthammer, M; Pelizzola, M; Cheng, E; Kovacs, D; Sznol, M; Ariyan, S; Narayan, D; Bacchiocchi, A; Molinaro, A; Kluger, Y; Deng, M; Tran, N; Zhang, W; Picardo, M; Enghild, J
Human DNA methylomes at base resolution show widespread epigenomic differences
2009 Lister, R; Pelizzola, M; Dowen, R; Hawkins, R; Hon, G; Tonti-Filippini, J; Nery, J; Lee, L; Ye, Z; Ngo, Q; Edsall, L; Antosiewicz-Bourget, J; Stewart, R; Ruotti, V; Millar, A; Thomson, J; Ren, B; Ecker, J
Distinct epigenomic landscapes of pluripotent and lineage-committed human cells
2010 Hawkins, R; Hon, G; Lee, L; Ngo, Q; Lister, R; Pelizzola, M; Edsall, L; Kuan, S; Luu, Y; Klugman, S; Antosiewicz-Bourget, J; Ye, Z; Espinoza, C; Agarwahl, S; Shen, L; Ruotti, V; Wang, W; Stewart, R; Thomson, J; Ecker, J; Ren, B
Comparison of sequencing-based methods to profile DNA methylation and identification of monoallelic epigenetic modifications
2010 Harris, R; Wang, T; Coarfa, C; Nagarajan, R; Hong, C; Downey, S; Johnson, B; Fouse, S; Delaney, A; Zhao, Y; Olshen, A; Ballinger, T; Zhou, X; Forsberg, K; Gu, J; Echipare, L; O'Geen, H; Lister, R; Pelizzola, M; Xi, Y; Epstein, C; Bernstein, B; Hawkins, R; Ren, B; Chung, W; Gu, H; Bock, C; Gnirke, A; Zhang, M; Haussler, D; Ecker, J; Li, W; Farnham, P; Waterland, R; Meissner, A; Marra, M; Hirst, M; Milosavljevic, A; Costello, J
Temporal gene expression profile of the hippocampus following trace fear conditioning
2010 Sirri, A; Bianchi, V; Pelizzola, M; Mayhaus, M; Ricciardi-Castagnoli, P; Toniolo, D; D'Adamo, P
Hotspots of aberrant epigenomic reprogramming in human induced pluripotent stem cells
2011 Lister, R; Pelizzola, M; Kida, Y; Hawkins, R; Nery, J; Hon, G; Antosiewicz-Bourget, J; O'Malley, R; Castanon, R; Klugman, S; Downes, M; Yu, R; Stewart, R; Ren, B; Thomson, J; Evans, R; Ecker, J