Sfoglia per Autore
Prognostic Biomarkers in Breast Cancer via Multi-Omics Clustering Analysis
2025 Malighetti, F; Villa, M; Villa, A; Pelucchi, S; Aroldi, A; Cortinovis, D; Canova, S; Capici, S; Cazzaniga, M; Mologni, L; Ramazzotti, D; Cordani, N
Protocol for obtaining cancer type and subtype predictions using subSCOPE
2025 Grewal, J; Robertson, A; Ellrott, K; Wong, C; Lee, J; Yau, C; Tercan, B; Castro, M; Benz, C; Knijnenburg, T; Castro, M; Chagas, V; Apolonio, V; Friedl, V; Stuart, J; Uzunangelov, V; Wong, C; Andersen, J; Cherniack, A; Gao, G; Getz, G; Hoyt, S; Roh, W; Westlake, L; Benz, C; Grewal, J; Jones, S; Robertson, A; Caesar-Johnson, S; Demchok, J; Felau, I; Kemal, A; Tarnuzzer, R; Wang, Z; Yang, L; Zenklusen, J; Akbani, R; Broom, B; Ju, Z; Schultz, A; Ojesina, A; Hoadley, K; Lal, A; Ramazzotti, D; Wang, C; Lazar, A; Roberts, L; Kim, T; Shmulevich, I; Tercan, B; Charonyktakis, P; Lagani, V; Tsamardinos, I; Drill, E; Shen, R; Ferguson, M; Chiotti, K; Ellrott, K; Karlberg, B; Lee, J; Lowenstein, E; Struck, A; Spellman, P; Yau, C; Hinoue, T; Laird, P; Zenklusen, J; Cherniack, A; Laird, P; Jones, S
Comprehensive analysis of mutational processes across 20 000 adult and pediatric tumors
2025 Villa, M; Malighetti, F; De, S; Villa, A; Cordani, N; Aroldi, A; Antoniotti, M; Caravagna, G; Graudenzi, A; Piazza, R; Mologni, L; Ramazzotti, D
Author Correction: Integrative analysis of KEAP1/NFE2L2 alterations across 3600+ tumors reveals an NRF2 expression signature as a prognostic biomarker in cancer (npj Precision Oncology, (2025), 9, 1, (291), 10.1038/s41698-025-01088-0)
2025 Crippa, V; Cordani, N; Villa, A; Malighetti, F; Villa, M; Sala, L; Aroldi, A; Piazza, R; Cortinovis, D; Mologni, L; Ramazzotti, D
Classification of non-TCGA cancer samples to TCGA molecular subtypes using compact feature sets
2025 Ellrott, K; Wong, C; Yau, C; Castro, M; Lee, J; Karlberg, B; Grewal, J; Lagani, V; Tercan, B; Friedl, V; Hinoue, T; Uzunangelov, V; Westlake, L; Loinaz, X; Felau, I; Wang, P; Kemal, A; Caesar-Johnson, S; Shmulevich, I; Lazar, A; Tsamardinos, I; Hoadley, K; Ramazzotti, D; Robertson, A; Knijnenburg, T; Benz, C; Stuart, J; Zenklusen, J; Cherniack, A; Laird, P
Integrative multi-omics analysis enables a comprehensive characterization of prostate cancer and unveils metastasis-associated candidate biomarkers
2025 Villa, M; Cazzaniga, G; Bolognesi, M; Malighetti, F; Crippa, V; Aroldi, A; Bozzini, G; Pagni, F; Piazza, R; Mologni, L; Ramazzotti, D
Hb Monza: A novel extensive HBB duplication with preserved α-β subunit interaction and unstable hemoglobin phenotype
2025 Civettini, I; Zappaterra, A; Corti, P; Messina, A; Aroldi, A; Biondi, A; Cavalca, F; Crippa, V; Crosti, F; Ferrari, G; Malighetti, F; Mologni, L; Piperno, A; Ramazzotti, D; Scollo, C; Zambon, A; Rossi, F; Gambacorti-Passerini, C
Integrative analysis of KEAP1/NFE2L2 alterations across 3600+ tumors reveals an NRF2 expression signature as a prognostic biomarker in cancer
2025 Crippa, V; Cordani, N; Villa, A; Malighetti, F; Villa, M; Sala, L; Aroldi, A; Piazza, R; Cortinovis, D; Mologni, L; Ramazzotti, D
Protocol for assessing distances in pathway space for classifier feature sets from machine learning methods
2025 Tercan, B; Apolonio, V; Chagas, V; Wong, C; Lee, J; Yau, C; Benz, C; Stuart, J; Karlberg, B; Ellrott, K; Grewal, J; Jones, S; Knijnenberg, T; Castro, M; Chagas, V; Apolonio, V; Friedl, V; Stuart, J; Uzunangelov, V; Wong, C; Beroukhim, R; Cherniack, A; Gao, G; Getz, G; Hoyt, S; Loinaz, X; Roh, W; Stewart, C; Westlake, L; Benz, C; Grewal, J; Jones, S; Robertson, A; Caesar-Johnson, S; Demchok, J; Felau, I; Kemal, A; Tarnuzzer, R; Wang, P; Wang, Z; Yang, L; Zenklusen, J; Akbani, R; Broom, B; Ju, Z; Schultz, A; Ojesina, A; Hoadley, K; Lal, A; Ramazzotti, D; Wang, C; Lazar, A; Roberts, L; Tercan, B; Kim, T; Shmulevich, I; Charonyktakis, P; Lagani, V; Tsamardinos, I; Drill, E; Shen, R; Ferguson, M; Chiotti, K; Ellrott, K; Karlberg, B; Lee, J; Lowenstein, E; Spellman, P; Struck, A; Yau, C; Hayes, D; Hinoue, T; Shen, H; Laird, P; Zenklusen, J; Robertson, A; Laird, P; Cherniack, A; Castro, M
Angiogenesis-Related New Mechanisms for Chemotherapy-Induced Painful Peripheral Neuropathy in the Rat
2024 Carozzi, V; Rodriguez-Menendez, V; Pozzi, E; Canta, A; Chiorazzi, A; Ballarini, E; Alberti, P; Meregalli, C; Cordani, N; Donà, E; Ramazzotti, D; Bravin, A; Tromba, G; Cavaletti, G; Giuliano Zippo, A
Evaluating the performance of large language models in haematopoietic stem cell transplantation decision-making
2024 Civettini, I; Zappaterra, A; Granelli, B; Rindone, G; Aroldi, A; Bonfanti, S; Colombo, F; Fedele, M; Grillo, G; Parma, M; Perfetti, P; Terruzzi, E; Gambacorti-Passerini, C; Ramazzotti, D; Cavalca, F
Tumor evolution metrics predict recurrence beyond 10 years in locally advanced prostate cancer
2024 Fernandez-Mateos, J; Cresswell, G; Trahearn, N; Webb, K; Sakr, C; Lampis, A; Stuttle, C; Corbishley, C; Stavrinides, V; Zapata, L; Spiteri, I; Heide, T; Gallagher, L; James, C; Ramazzotti, D; Gao, A; Kote-Jarai, Z; Acar, A; Truelove, L; Proszek, P; Murray, J; Reid, A; Wilkins, A; Hubank, M; Eeles, R; Dearnaley, D; Sottoriva, A
Control-FREEC viewer: a tool for the visualization and exploration of copy number variation data
2024 Crippa, V; Fina, E; Ramazzotti, D; Piazza, R
Idiopathic erythrocytosis: a germline disease?
2024 Elli, E; Mauri, M; D’Aliberti, D; Crespiatico, I; Fontana, D; Redaelli, S; Pelucchi, S; Spinelli, S; Manghisi, B; Cavalca, F; Aroldi, A; Ripamonti, A; Ferrari, S; Palamini, S; Mottadelli, F; Massimino, L; Ramazzotti, D; Cazzaniga, G; Piperno, A; Gambacorti-Passerini, C; Piazza, R
Recurrent somatic mutations of FAT family cadherins induce an aggressive phenotype and poor prognosis in anaplastic large cell lymphoma
2024 Villa, M; Geeta, G; Malighetti, F; Mauri, M; Arosio, G; Cordani, N; Lobello, C; Larose, H; Pirola, A; D'Aliberti, D; Massimino, L; Criscuolo, L; Pagani, L; Chinello, C; Mastini, C; Fontana, D; Bombelli, S; Meneveri, R; Lovisa, F; Mussolin, L; Janikova, A; Pospíšilová, Š; Turner, S; Inghirami, G; Magni, F; Urso, M; Pagni, F; Ramazzotti, D; Piazza, R; Chiarle, R; Gambacorti-Passerini, C; Mologni, L
Integrating mutational profiles and transcriptional data with ASTUTE to elucidate the key molecular functions involved in the pathogenesis of cancer
2024 Crippa, V; Fontana, D; Civettini, I; Mologni, L; Piazza, R; Gambacorti Passerini, C; Ramazzotti, D
Anaplastic Lymphoma Kinase (ALK) Inhibitors Enhance Phagocytosis Induced by CD47 Blockade in Sensitive and Resistant ALK-Driven Malignancies
2024 Malighetti, F; Villa, M; Mauri, M; Piane, S; Crippa, V; Crespiatico, I; Cocito, F; Bossi, E; Steidl, C; Civettini, I; Scollo, C; Ramazzotti, D; Gambacorti-Passerini, C; Piazza, R; Mologni, L; Aroldi, A
First-Hit SETBP1 Mutations Cause a Myeloproliferative Disorder with Bone Marrow Fibrosis Mimicking Triple Negative Myelofibrosis
2024 Fontana, D; Crespiatico, I; Zaghi, M; Mastini, C; D’Aliberti, D; Mauri, M; Mercado, C; Spinelli, S; Crippa, V; Inzoli, E; Manghisi, B; Civettini, I; Ramazzotti, D; Sangiorgio, V; Gengotti, M; Brambilla, V; Aroldi, A; Banfi, F; Barone, C; Orsenigo, R; Riera, L; Riminucci, M; Corsi, A; Breccia, M; Morotti, A; Cilloni, D; Roccaro, A; Sacco, A; Stagno, F; Serafini, M; Mottadelli, F; Cazzaniga, G; Pagni, F; Chiarle, R; Azzoni, E; Sessa, A; Gambacorti-Passerini, C; Elli, E; Mologni, L; Piazza, R
Clonal Lineage Tracing with Somatic Delivery of Recordable Barcodes Reveals Migration Histories of Metastatic Prostate Cancer
2024 Serio, R; Scheben, A; Lu, B; Gargiulo, D; Patruno, L; Buckholtz, C; Chaffee, R; Jibilian, M; Persaud, S; Staklinski, S; Hassett, R; Brault, L; Ramazzotti, D; Barbieri, C; Siepel, A; Nowak, D
First-hit SETBP1 mutations cause a myeloproliferative disorder with bone marrow fibrosis
2024 Crespiatico, I; Zaghi, M; Mastini, C; D'Aliberti, D; Mauri, M; Mercado, C; Fontana, D; Spinelli, S; Crippa, V; Inzoli, E; Manghisi, B; Civettini, I; Ramazzotti, D; Sangiorgio, V; Gengotti, M; Brambilla, V; Aroldi, A; Banfi, F; Barone, C; Orsenigo, R; Riera, L; Riminucci, M; Corsi, A; Breccia, M; Morotti, A; Cilloni, D; Roccaro, A; Sacco, A; Stagno, F; Serafini, M; Mottadelli, F; Cazzaniga, G; Pagni, F; Chiarle, R; Azzoni, E; Sessa, A; Gambacorti Passerini, C; Elli, E; Mologni, L; Piazza, R
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