Ribosome biosynthesis is essential for cell growth because it provides the molecular machinery necessary for protein production. Proteins constitute about 50% of total dry biomass, and ribosomes (comprising 60% RNA and 40% proteins) can make up as much as 30% of dry biomass. Since ribosome biogenesis requires significant energy, cells must carefully regulate their production based on growth conditions. Starting from a simplified model of ribosome biosynthesis that explicitly accounts for the dynamics of ribosomal subunits and their shared precursor, we identify specific parameter conditions that ensure exponential growth and derive a closed-form expression for the growth rate. These findings extend previous results obtained according to simplifying constraints, offering a more detailed understanding of ribosome biosynthesis dynamics without approximations. By integrating the ribosome biosynthesis module into a multi-scale population model of Saccharomyces cerevisiae metabolism, growth, and cell cycle, we assess the biological relevance of our analysis, demonstrating consistency between intracellular ribosome production constraints and population-level growth behavior.

Papa, F., Di Bernardo, A., Busti, S., Vanoni, M., Palumbo, P. (2026). Conditions for Exponential Growth in a Ribosome Biosynthesis Model Across Multiple Scales. IEEE CONTROL SYSTEMS LETTERS, 10, 2017-2022 [10.1109/LCSYS.2026.3707461].

Conditions for Exponential Growth in a Ribosome Biosynthesis Model Across Multiple Scales

Busti S.;Vanoni M.;Palumbo P.
Ultimo
2026

Abstract

Ribosome biosynthesis is essential for cell growth because it provides the molecular machinery necessary for protein production. Proteins constitute about 50% of total dry biomass, and ribosomes (comprising 60% RNA and 40% proteins) can make up as much as 30% of dry biomass. Since ribosome biogenesis requires significant energy, cells must carefully regulate their production based on growth conditions. Starting from a simplified model of ribosome biosynthesis that explicitly accounts for the dynamics of ribosomal subunits and their shared precursor, we identify specific parameter conditions that ensure exponential growth and derive a closed-form expression for the growth rate. These findings extend previous results obtained according to simplifying constraints, offering a more detailed understanding of ribosome biosynthesis dynamics without approximations. By integrating the ribosome biosynthesis module into a multi-scale population model of Saccharomyces cerevisiae metabolism, growth, and cell cycle, we assess the biological relevance of our analysis, demonstrating consistency between intracellular ribosome production constraints and population-level growth behavior.
Articolo in rivista - Articolo scientifico
mathematical modeling; qualitative behavior analysis; Systems biology;
English
25-giu-2026
2026
10
2017
2022
reserved
Papa, F., Di Bernardo, A., Busti, S., Vanoni, M., Palumbo, P. (2026). Conditions for Exponential Growth in a Ribosome Biosynthesis Model Across Multiple Scales. IEEE CONTROL SYSTEMS LETTERS, 10, 2017-2022 [10.1109/LCSYS.2026.3707461].
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Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/10281/620301
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