Disruption of chromatin folding domains by somatic genomic rearrangements in human cancer
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Persistence of Drug-Resistant Leukemic Stem Cells and Impaired NK Cell Immunity in CML Patients Depend on MIR300 Antiproliferative and PP2A-Activating Functions
2020 Silvestri, G; Trotta, R; Stramucci, L; Ellis, J; Harb, J; Neviani, P; Wang, S; Eisfeld, A; Walker, C; Zhang, B; Srutova, K; Gambacorti-Passerini, C; Pineda, G; Jamieson, C; Stagno, F; Vigneri, P; Nteliopoulos, G; May, P; Reid, A; Garzon, R; Roy, D; Moutuou, M; Guimond, M; Hokland, P; Deininger, M; Fitzgerald, G; Harman, C; Dazzi, F; Milojkovic, D; Apperley, J; Marcucci, G; Qi, J; Polakova, K; Zou, Y; Fan, X; Baer, M; Calabretta, B; Perrotti, D
A deep learning system accurately classifies primary and metastatic cancers using passenger mutation patterns
2020 Jiao, W; Atwal, G; Polak, P; Karlic, R; Cuppen, E; Al-Shahrour, F; Atwal, G; Bailey, P; Biankin, A; Boutros, P; Campbell, P; Chang, D; Cooke, S; Deshpande, V; Faltas, B; Faquin, W; Garraway, L; Getz, G; Grimmond, S; Haider, S; Hoadley, K; Jiao, W; Kaiser, V; Karlic, R; Kato, M; Kubler, K; Lazar, A; C. 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Genomic footprints of activated telomere maintenance mechanisms in cancer
2020 Sieverling, L; Hong, C; Koser, S; Ginsbach, P; Kleinheinz, K; Hutter, B; Braun, D; Cortes-Ciriano, I; Xi, R; Kabbe, R; Park, P; Eils, R; Schlesner, M; Akdemir, K; Alvarez, E; Baez-Ortega, A; Beroukhim, R; Boutros, P; Bowtell, D; Brors, B; Burns, K; Campbell, P; Chan, K; Chen, K; Cortes-Ciriano, I; Dueso-Barroso, A; Dunford, A; Edwards, P; Estivill, X; Etemadmoghadam, D; Feuerbach, L; Fink, J; Frenkel-Morgenstern, M; Garsed, D; Gerstein, M; Gordenin, D; Haan, D; Haber, J; Hess, J; Hutter, B; Imielinski, M; Jones, D; Y. 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Inferring structural variant cancer cell fraction
2020 Cmero, M; Yuan, K; Ong, C; Schroder, J; Adams, D; Anur, P; Beroukhim, R; Boutros, P; Bowtell, D; Campbell, P; Cao, S; Christie, E; Cun, Y; Dawson, K; Demeulemeester, J; Dentro, S; Deshwar, A; Donmez, N; Drews, R; Eils, R; Fan, Y; Fittall, M; Garsed, D; Gerstung, M; Getz, G; Gonzalez, S; Ha, G; Haase, K; Imielinski, M; Jerman, L; Ji, Y; Jolly, C; Kleinheinz, K; Lee, J; Lee-Six, H; Leshchiner, I; Livitz, D; Malikic, S; Martincorena, I; Mitchell, T; Morris, Q; Mustonen, V; Oesper, L; Peifer, M; Peto, M; Raphael, B; Rosebrock, D; Rubanova, Y; Sahinalp, S; Salcedo, A; Schlesner, M; Schumacher, S; Sengupta, S; Shi, R; Shin, S; Spellman, P; Spiro, O; Stein, L; Tarabichi, M; Van Loo, P; Vembu, S; Vazquez-Garcia, I; Wang, W; Wedge, D; Wheeler, D; Wintersinger, J; Yang, T; Yao, X; Yu, K; Zhu, H; Corcoran, N; Papenfuss, T; Hovens, C; Markowetz, F; Macintyre, G; Aaltonen, L; Abascal, F; Abeshouse, A; Aburatani, H; Adams, D; Agrawal, N; Ahn, K; Ahn, S; Aikata, H; Akbani, R; Akdemir, K; Al-Ahmadie, H; 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The landscape of viral associations in human cancers
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Reconstructing evolutionary trajectories of mutation signature activities in cancer using TrackSig
2020 Rubanova, Y; Shi, R; Harrigan, C; Li, R; Wintersinger, J; Sahin, N; Deshwar, A; Dentro, S; Leshchiner, I; Gerstung, M; Jolly, C; Haase, K; Tarabichi, M; Wintersinger, J; Deshwar, A; Yu, K; Gonzalez, S; Rubanova, Y; Macintyre, G; Adams, D; Anur, P; Beroukhim, R; Boutros, P; Bowtell, D; Campbell, P; Cao, S; Christie, E; Cmero, M; Cun, Y; Dawson, K; Demeulemeester, J; Donmez, N; Drews, R; Eils, R; Fan, Y; Fittall, M; Garsed, D; Getz, G; Ha, G; Imielinski, M; Jerman, L; Ji, Y; Kleinheinz, K; Lee, J; Lee-Six, H; Livitz, D; Malikic, S; Markowetz, F; Martincorena, I; Mitchell, T; Mustonen, V; Oesper, L; Peifer, M; Peto, M; Raphael, B; Rosebrock, D; Sahinalp, S; Salcedo, A; Schlesner, M; Schumacher, S; Sengupta, S; Shi, R; Shin, S; Spiro, O; Stein, L; Vazquez-Garcia, I; Vembu, S; Wheeler, D; Yang, T; Yao, X; Yuan, K; Zhu, H; Wang, W; Morris, Q; Spellman, P; Wedge, D; Van Loo, P; Morris, Q; Aaltonen, L; Abascal, F; Abeshouse, A; Aburatani, H; Adams, D; Agrawal, N; Ahn, K; Ahn, S; Aikata, H; Akbani, R; Akdemir, K; Al-Ahmadie, H; Al-Sedairy, S; Al-Shahrour, F; Alawi, M; Albert, M; Aldape, K; Alexandrov, L; Ally, A; Alsop, K; Alvarez, E; Amary, F; Amin, S; Aminou, B; Ammerpohl, O; Anderson, M; Ang, Y; Antonello, D; Anur, P; Aparicio, S; Appelbaum, E; Arai, Y; Aretz, A; Arihiro, K; Ariizumi, S; Armenia, J; Arnould, L; Asa, S; Assenov, Y; Atwal, G; Aukema, S; Auman, J; Aure, M; Awadalla, P; Aymerich, M; Bader, G; Baez-Ortega, A; Bailey, M; Bailey, P; Balasundaram, M; Balu, S; Bandopadhayay, P; Banks, R; Barbi, S; Barbour, A; Barenboim, J; Barnholtz-Sloan, J; Barr, H; Barrera, E; Bartlett, J; Bartolome, J; Bassi, C; Bathe, O; Baumhoer, D; Bavi, P; Baylin, S; Bazant, W; Beardsmore, D; Beck, T; Behjati, S; Behren, A; Niu, B; Bell, C; Beltran, S; Benz, C; Berchuck, A; Bergmann, A; Bergstrom, E; Berman, B; Berney, D; Bernhart, S; Beroukhim, R; Berrios, M; Bersani, S; Bertl, J; Betancourt, M; Bhandari, V; Bhosle, S; Biankin, A; Bieg, M; Bigner, D; Binder, H; Birney, E; Birrer, M; Biswas, N; 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Comprehensive molecular characterization of mitochondrial genomes in human cancers
2020 Yuan, Y; Y. 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Divergent mutational processes distinguish hypoxic and normoxic tumours
2020 Bhandari, V; C. 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High-coverage whole-genome analysis of 1220 cancers reveals hundreds of genes deregulated by rearrangement-mediated cis-regulatory alterations
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