MERELLI, IVAN
MERELLI, IVAN
DIPARTIMENTO DI INFORMATICA, SISTEMISTICA E COMUNICAZIONE (attivo dal 01/01/1999 al 30/09/2012)
Stochastic simulations on a grid framework for parameter sweep applications in biological models
2009 Mosca, E; Merelli, I; Milanesi, L; Cazzaniga, P; Pescini, D; Mauri, G
Grid Computing for Sensitivity Analysis of Stochastic Biological Models
2011 Merelli, I; Pescini, D; Mosca, E; Cazzaniga, P; Maj, C; Mauri, G; Milanesi, L
myMIR: a genome-wide microRNA targets identification and annotation tool
2011 Corrada, D; Viti, F; Merelli, I; Battaglia, C; Milanesi, L
Sensitivity analysis for studying the relation between biochemical reactions and metabolic phenotypes
2013 Maj, C; Mosca, E; Merelli, I; Mauri, G; Milanesi, L
Combining Bayesian approaches and evolutionary techniques for the inference of breast cancer networks
2016 Ramazzotti, D; Merelli, I; Gonçalves, I; Castelli, M; Beretta, S
New Graph-Based Algorithm for Comprehensive Identification and Tracking Retroviral Integration Sites
2016 Calabria, A; Beretta, S; Merelli, I; Spinozzi, G; Brasca, S; Benedicenti, F; Tenderini, E; Biffi, A; Montini, E
SPIRE, a modular pipeline for eQTL analysis of RNA-Seq data, reveals a regulatory hotspot controlling miRNA expression in: C. elegans
2016 Kel, I; Chang, Z; Galluccio, N; Romeo, M; Beretta, S; Diomede, L; Mezzelani, A; Milanesi, L; Dieterich, C; Merelli, I
PWHATSHAP: Efficient haplotyping for future generation sequencing
2016 Bracciali, A; Aldinucci, M; Patterson, M; Marschall, T; Pisanti, N; Merelli, I; Torquati, M
A Machine Learning Approach for the Integration of miRNA-Target Predictions
2016 Beretta, S; Castelli, M; Martinez, Y; Munoz, L; Silva, S; Trujillo, L; Milanesi, L; Merelli, I
VISPA2: a scalable pipeline for high-throughput identification and annotation of vector integration sites
2017 Spinozzi, G; Calabria, A; Brasca, S; Beretta, S; Merelli, I; Milanesi, L; Montini, E
Rank miRNA: A web tool for identifying polymorphisms altering miRNA target sites
2017 Beretta, S; Maj, C; Merelli, I
Low-Power Architectures for miRNA-Target Genome Wide Analysis
2017 Beretta, S; Morganti, L; Corni, E; Ferraro, A; Cesini, D; D'Agostino, D; Milanesi, L; Merelli, I
HIV-1-mediated insertional activation of STAT5B and BACH2 trigger viral reservoir in T regulatory cells
2017 Cesana, D; Santoni De Sio, F; Rudilosso, L; Gallina, P; Calabria, A; Beretta, S; Merelli, I; Bruzzesi, E; Passerini, L; Nozza, S; Vicenzi, E; Poli, G; Gregori, S; Tambussi, G; Montini, E
GenHap: Evolutionary Computation For Haplotype Assembly
2018 Tangherloni, A; Spolaor, S; Rundo, L; Nobile, M; Cazzaniga, P; Mauri, G; Liò, P; Besozzi, D; Merelli, I
A scalable genetic programming approach to integrate miRNA-target predictions: Comparing different parallel implementations of M3GP
2018 Beretta, S; Castelli, M; Muñoz, L; Trujillo, L; Martínez, Y; Popovič, A; Milanesi, L; Merelli, I
Computing Empirical P-Values for Estimating Gene-Gene Interactions in Genome-Wide Association Studies: A Parallel Computing Approach
2018 Giansant, V; D'Agostino, D; Maj, C; Beretta, S; Merelli, I
Improving eQTL Analysis Using a Machine Learning Approach for Data Integration: A Logistic Model Tree Solution
2018 Beretta, S; Castelli, M; Gonçalves, I; Kel, I; Giansanti, V; Merelli, I
Comparing Deep and Machine Learning Approaches in Bioinformatics: A miRNA-Target Prediction Case Study
2019 Giansanti, V; Castelli, M; Beretta, S; Merelli, I
Parallel Computing in Deep Learning: Bioinformatics Case Studiesa
2019 Giansanti, V; Beretta, S; Cesini, D; D'Agostino, D; Merelli, I
Precise Gene Editing Preserves Hematopoietic Stem Cell Function following Transient p53-Mediated DNA Damage Response
2019 Schiroli, G; Conti, A; Ferrari, S; della Volpe, L; Jacob, A; Albano, L; Beretta, S; Calabria, A; Vavassori, V; Gasparini, P; Salataj, E; Ndiaye-Lobry, D; Brombin, C; Chaumeil, J; Montini, E; Merelli, I; Genovese, P; Naldini, L; Di Micco, R